Gene SeSA_A0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0843 
Symbol 
ID6519192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp815300 
End bp816706 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content51% 
IMG OID642745977 
Productouter membrane porin, OprD family 
Protein accessionYP_002113793 
Protein GI194738352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACGT TTAGTGGCAA ACGTAGTACG CTGGCTCTGG CTATCGCCGG TATCACAGCA 
ATGTCGGGGT GGATCGTTGT TCCGCAGGCG CAAGCCTCCG GCTTTTTCGA CGACTCCACG
TTAACGGGCG GCATCTATTA TTGGCAGCGT GAACGCGATC GCAAAGATGT GACCGACGGC
GACAAATATA AAACTAACCT TTCTCATGCG ACCTGGAACG CTAACCTGGA TTTTCAGTCT
GGTTACGCTG CGGATATGTT CGGTCTGGAT ATCGCAGCGT TTACCGCGAT TGAAATGGCA
GAAAACGGCG ACAGCGGTCA TCCAAACGAA ATTGCCTTCT CGAAAAAGAA TAAAGGCTAC
GACGAAGACT ATTCCGGCGA TAAGAGTGGT ATCAGTCTTT ATAAAGCCGC CGCGAAATTT
AAATATGGCC CGGTCTGGGC GCGCGCCGGT TATATTCAGC CTACCGGTCA GACGCTGTTA
GCGCCGCACT GGAGTTTTAT GCCGGGTACT TATCAGGGGG CGGAAGCCGG CGCCAGTTTT
GACTATGGCG ATGCGGGCGC GTTAAGTTTT TCCTACATGT GGACTAACGA ATATAAAGCG
CCGTGGCATA CCGAAATGGA TAAGTTTTAT CAGGCGGATA AAAAAACCAA TGTGGATTAT
CTCCACTCCA TCGGCGCGAA GTACGACTTC AAAAATGATC TGGTGCTGGA AGCGGCGTTT
GGTCAGTCCG AAGGCTATGT CGATCAATAT TTCGCGAAGG CCAGCTATAA ATTTGATTTA
GGCGGCAATC CGTTCACCAC CAGTTACCAG TTCTACGGCG CGCGCGATAA AGTAGACGAT
CGCAGCGTGA ATGATATTTA CGACGGTACG GCCTGGCTGC AGGCGTTGAC CTTCGGCTAC
AAAGTCGCGG AAGTGGTTGA CCTGCGTCTG GAGGGCACCT GGGTGAAAGC GGACGGTCAG
CAGGGCTATT TTCTGCAACG TATGACGCCA ACCTACGCCT CTTCAAACGG TCGTCTGGAT
ATCTGGTGGG ATAACCGCTC CGACTTTAAC GCTAACGGTG AAAAGGCGGT TTTCTTCGGC
GCGATGTATG ACCTGAAAAA CTGGAATCTG CCGGGCTGGG CTGTGGGCGC GTCTTATGTT
TACGCCTGGG ATGCTAAACC GGCAACCTGG CAAAGTAACC CGGATGCTTA CTACGACAAA
AACCGCACTA TCGAAGAGTC CTCATACAGT CTGGATGCGG TTTATACCCT GCAGGAGGGG
CGTGCCAAAG GCACCATGTT CAAGCTGCAC TTCACCGAAT ATGACAACCA CTCCAATATT
CCAAGCTGGG GCGGTGGTTA CGGCAACATC TTCCAGGATG AGCGTGACGT GAAATTTATT
GTTATTGCGC CATTCACTAT TTTCTGA
 
Protein sequence
MRTFSGKRST LALAIAGITA MSGWIVVPQA QASGFFDDST LTGGIYYWQR ERDRKDVTDG 
DKYKTNLSHA TWNANLDFQS GYAADMFGLD IAAFTAIEMA ENGDSGHPNE IAFSKKNKGY
DEDYSGDKSG ISLYKAAAKF KYGPVWARAG YIQPTGQTLL APHWSFMPGT YQGAEAGASF
DYGDAGALSF SYMWTNEYKA PWHTEMDKFY QADKKTNVDY LHSIGAKYDF KNDLVLEAAF
GQSEGYVDQY FAKASYKFDL GGNPFTTSYQ FYGARDKVDD RSVNDIYDGT AWLQALTFGY
KVAEVVDLRL EGTWVKADGQ QGYFLQRMTP TYASSNGRLD IWWDNRSDFN ANGEKAVFFG
AMYDLKNWNL PGWAVGASYV YAWDAKPATW QSNPDAYYDK NRTIEESSYS LDAVYTLQEG
RAKGTMFKLH FTEYDNHSNI PSWGGGYGNI FQDERDVKFI VIAPFTIF