Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0784 |
Symbol | |
ID | 6516280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 761353 |
End bp | 763014 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642745919 |
Product | sensor kinase DpiB |
Protein accession | YP_002113742 |
Protein GI | 194737782 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.636686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.450792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTATC AGAAAAATAA AAAGCTGTTT CCTTTTTTTC GGCAACTCGC GTTTCCGTTA CGTATTTTTC TGCTCATTCT GGTGGTTTCT GTTTTCATCG TGGCAGCGTT AGCACAATAT TTGTCTGCCA GTTTCGAAGA TTATCTGGCG TCCCATGTTC GTGATATGGC GATGAATCAG GCAAAAATTA TTGCTTCTAA CGACAGCATT ATCGCCGCCG TAAAAAACCG GGACTATAAA CGCCTGGCGA TAATTGCGAA TAAACTGCAG CGCGGGACGG ATTTTGACTA TGTGGTGATA GGCGATCGCC ACTCGATCCG GCTTTACCAT CCGAATCCGG AAAAAATCGG CTATCCCATG CAGTTTACGA AACCCGGCGC GTTGGAAAGA GGAGAAAGTT ATTTCATTAC CGGTAAGGGC TCAATAGGGA TGGCGATGCG CGCCAAAACG CCTATCTTTG ACAACGAAGG CAACGTGATC GGCGTTGTTT CAATTGGCTA TCTGGTCAGT AAAATCGACT CCTGGCGGCT GGACTTCTTA TTACCGATGG CGGGGGTTTT TGTCCTGTTG CTGTTGGTAT TAATGCTGCT TTCCTGGTTT TTCGCCGCGC ATATCCGCCG ACAAATGCTG GGCATGGAGC CGAAACAGAT TGCGCGCGTG GTACGCCAGC AGGAGGCGTT GTTTAGCTCG GTTTATGAAG GGCTGATCGC CGTTGATCCG GAGGGACATA TCACCGCGAT TAACCGCAAT GCGAGAAAAA TGTTGGGGCT GCCGTCGCCG GGGCGTCAGT GGCTGGGCAA GCTGATAGCG GAAGTCGTCA ATCCGGCAGA CTTTTTTACC TGCCAGATCG CAGAAAGACG CCAGGACGTG ATGGCCAACT TCAATGGCCT GAGCGTCATC GCCAATCGTG AAGCTATCCG TTCCGGCGAG GAGTTGCTGG GCGCTATTAT TAGTTTTCGC AGCAAAGATG AAATCGCGAC GTTGAACGCG CAGCTAACCC AGATTAAACA GTATGTTGAG AGCCTGCGCA CGCTACGCCA TGAGCACCTG AACTGGATGT CGACTCTGAA CGGCCTGCTG CAAATGAAGG AGTATGATCG GGTCAGAGAG ATGGTGCAGG GGGAGTCGCA GGCGCAGCAG CAACTTATTG ATAGTTTACG CGGCGCCTTC GCCGATCGTC AGGTGGCCGG TTTGCTGTTT GGCAAAGTTC AGCGCGCGCG TGAACTGGGG CTCAAGATGG TGATTGTTCC CGGCAGCCAG CTACATCAAC TGCCGGAGGG GCTGGATAGC ACGGAGTTCG CCGCCATCGT CGGGAATCTG CTGGATAACG CGTTTGAGGC GAGTTTACGT ACACAGGAAG GCGACAATAC CATCGAACTT TTCCTGAGCG ACGAGGGCGA CGAGGTGGTG ATAGAGGTCG CCGACCAGGG CTGCGGAGTT CCTGAAGCGC TGCGGGAAAA AATTTTTGAG CAGGGCGTAA GTACCCGAAC CGACGAACCC GGTGAGCATG GTATCGGGTT ATATCTGATT GCAAGTTATG TGGGGCGCTG TGGCGGGGTC ATTACGCTGG AAGACAATGA TCCTTGTGGC ACCTTATTTT CTTTATTCCT TCCGAAAGTG AAAAAAAACG ATGACAGAAC CATTAACCCT ATTGATCGTT GA
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Protein sequence | MSYQKNKKLF PFFRQLAFPL RIFLLILVVS VFIVAALAQY LSASFEDYLA SHVRDMAMNQ AKIIASNDSI IAAVKNRDYK RLAIIANKLQ RGTDFDYVVI GDRHSIRLYH PNPEKIGYPM QFTKPGALER GESYFITGKG SIGMAMRAKT PIFDNEGNVI GVVSIGYLVS KIDSWRLDFL LPMAGVFVLL LLVLMLLSWF FAAHIRRQML GMEPKQIARV VRQQEALFSS VYEGLIAVDP EGHITAINRN ARKMLGLPSP GRQWLGKLIA EVVNPADFFT CQIAERRQDV MANFNGLSVI ANREAIRSGE ELLGAIISFR SKDEIATLNA QLTQIKQYVE SLRTLRHEHL NWMSTLNGLL QMKEYDRVRE MVQGESQAQQ QLIDSLRGAF ADRQVAGLLF GKVQRARELG LKMVIVPGSQ LHQLPEGLDS TEFAAIVGNL LDNAFEASLR TQEGDNTIEL FLSDEGDEVV IEVADQGCGV PEALREKIFE QGVSTRTDEP GEHGIGLYLI ASYVGRCGGV ITLEDNDPCG TLFSLFLPKV KKNDDRTINP IDR
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