Gene SeSA_A0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0666 
Symbol 
ID6516555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp650260 
End bp651447 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content46% 
IMG OID642745809 
Productintegrase 
Protein accessionYP_002113632 
Protein GI194735670 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.214947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000000824162 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCTAA CAGCCCGCCA GATCAGTACG GCGAAACCAA CGGAGAAACC ATATAAGCTG 
TCTGATGGCG GTGGTTTGTA TCTGCTGGTT AACCCGAACG GCTCCCGATA CTGGCGTATG 
AAGTATCGCT ATGCAGGTAA GGAGAAACTT CTTTCCATTG GCGTTTATCC TGATGTGACG 
CTTGCGGAAG CAAGAGACAA ACGAACCCAG GCTAAACGTA TACTTGCTGC GGGCGATGAT 
CCATCTGAAG TAAAACAGGC CGAGAGAGAG GCAAAGAATC TTGCGGTTAA TAACAGCTTT 
GAACTTCTGG CGCTTGAATG GCATGAGCAT AAAAAGCCAA ACTGGTCTTC AGGCTATGCT 
GACGACATTC TTGAATATCT GCGAAAAGAC ATATTCCCAT ATATCGGTAA GAAAGCCATA 
ACAGATATTA AGCCGATGAC TATGCTCTCC GTGCTGAAAA AAATGGAGGA TCGTGGTGTA 
CTGGATAAGC TAAAAAAAAC TAGGCAAGCC TGCCGACAGA TATTTACTTA TGCAATTATA 
ACCGGCAGAG CTGAGTTTAA TCCCGTAACG GATTTAGCTG GAGCGCTGAA AACGCCAAAG 
CAACAACATT TCCCGCATCT GATGCCAACT CAGATTGGCC CCTTCATTCA TGCTGTTAAT 
ACCTACTCAG GCAGTAAAGT AACCCGCATC GCTACGCTAT TACTTATGTA TACCAGTGTC 
AGGACAATCG AGTTAAGGGC TTCTGAATGG ACTGAGTTCG ACCTGGACAA CGATTTGTGG 
CAGATCCCCA AGGAACGTAT GAAGATGCGC CGTCCTCACC TTGTACCGCT TTCAAGGCAG 
GTTAAATCTC ATCTGCTGGA ACTAAAAAAG ATCACTGGTT GGGGTAAGTA TGTTTTCCCC 
GGTCGCAATG ATGCCCACAA GCCAATGAGT GAGGCCAGTA TTAATCAGGT GATTAAGCGC 
ATAGGTTTTG CAGGAAAGGT CACAGGACAC GGATTCAGAC ACACCATGAG TACCATATTA 
CATGAAAAGG GGTTCAACTC TGCATGGATA GAAGCACAAC TGGCGCACGC TGACAGGAAT 
ACTATCCGTG GAACTTACAA TCATGCTCAG TACCTTGACG GTCGACGGGA GATGCTTCAG 
TGGTACGCTG ACTATCTGGA TGAGTTGGTT GGAAAAGTGG TGGGTTAA
 
Protein sequence
MKLTARQIST AKPTEKPYKL SDGGGLYLLV NPNGSRYWRM KYRYAGKEKL LSIGVYPDVT 
LAEARDKRTQ AKRILAAGDD PSEVKQAERE AKNLAVNNSF ELLALEWHEH KKPNWSSGYA 
DDILEYLRKD IFPYIGKKAI TDIKPMTMLS VLKKMEDRGV LDKLKKTRQA CRQIFTYAII 
TGRAEFNPVT DLAGALKTPK QQHFPHLMPT QIGPFIHAVN TYSGSKVTRI ATLLLMYTSV 
RTIELRASEW TEFDLDNDLW QIPKERMKMR RPHLVPLSRQ VKSHLLELKK ITGWGKYVFP 
GRNDAHKPMS EASINQVIKR IGFAGKVTGH GFRHTMSTIL HEKGFNSAWI EAQLAHADRN 
TIRGTYNHAQ YLDGRREMLQ WYADYLDELV GKVVG