Gene SeSA_A0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0600 
Symbol 
ID6520001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp600701 
End bp601864 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content51% 
IMG OID642745744 
Productprophage DLP12 integrase 
Protein accessionYP_002113567 
Protein GI194734718 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.000371504 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAATCT TCCGTAGAGG TGAAATATGG TACGCCTCGT ACTCGCTCCC GGGCGGGAAG 
CGAATTAAGG AATCTCTTGG GACAGCGGAC AAGCGGCAAG CTCAGGAGTT GCACGACAAA 
AGAAAGGCTG AACTCTGGCG AGTAGACAAG CTCGGCGACT TTCCTGAAGT GACTTTTGAA 
GAAGCATGCC TCCGCTGGCT GGAAGAGAAA GCAGACAAGA AATCGCTCGA TACCGATAAA 
GGCCGGATGG GATTCTGGCT TGAGCATTTC GAAGGAGTAA GGATAAAGGA TATCACTGAG 
GCGAAGATTT ACGCCGCGGT GAGCAGGATG CAAAACAGGA AGGTAAAGGA GATATGGCAG 
CAGAAAGTTG AATCTGCCAA GAGAAAGGGT AAAGAAGCGC CAGTATTTGA GCCCAAGCCG 
GTCACCACAT CGACAAAGGC AAAGCACCTC GCACTGATGA AGGCCATTCT CCGGGCGGCA 
GAACGTGACT GGAAATGGCT GGAGAAAGCG CCAGTTATCA AGATACCGTC AGTGAGAAAT 
AAGCGCGTTC GGTGGCTTGA GCATGAAGAG GCGAAAAGGC TGATTGATGA ATGTCCGGAG 
CCGCTGAGGT CGGTCGTTAA GTTTGCGCTG GCAACCGGCC TCAGAAGGTC GAACATCATC 
AATTTGGAAT GGCAACAGAT TGACATGCAA CGTCGTGTTG CCTGGGTGAA CCCTGAAGAC 
AGCAAGTCAA ACCGCGCTAT TGGCGTAGCG CTAAATGACA CTGCCTGTAA GGTATTGCGT 
GGCCAGATTG GTAAGCATCA TAAATGGGTG TTCGTACATA CGAAAGAAGG CATCCGGCCC 
GATGGCTCAA AGACGCCGAC TATCAGAAAG ATGCGCGTCG ATGACCAGCG AGCATGGAAT 
GCAGCTTGCC GCCGGGCTGG AATTGAGGAT TTCCGTTTCC ACGATCTGAG GCACACGTGG 
GCCAGTTGGC TAATTCAGTC CGGAGTGCCG CTTTCTGTTC TTCAGGAAAT GGGAGGATGG 
GAGAGCATCG AGATGGTGCG CCGATATGCT CACCTTGCGC CGAATCATTT AACGGAACAC 
GCGAGGCAAA TTGACTCGAT TTTCAGTGAT GATGTCCCAA ATATGTCCCA TATGGAAAAT 
AAGGAGGGAA TTAAAGAGGC GTAA
 
Protein sequence
MSIFRRGEIW YASYSLPGGK RIKESLGTAD KRQAQELHDK RKAELWRVDK LGDFPEVTFE 
EACLRWLEEK ADKKSLDTDK GRMGFWLEHF EGVRIKDITE AKIYAAVSRM QNRKVKEIWQ 
QKVESAKRKG KEAPVFEPKP VTTSTKAKHL ALMKAILRAA ERDWKWLEKA PVIKIPSVRN 
KRVRWLEHEE AKRLIDECPE PLRSVVKFAL ATGLRRSNII NLEWQQIDMQ RRVAWVNPED 
SKSNRAIGVA LNDTACKVLR GQIGKHHKWV FVHTKEGIRP DGSKTPTIRK MRVDDQRAWN 
AACRRAGIED FRFHDLRHTW ASWLIQSGVP LSVLQEMGGW ESIEMVRRYA HLAPNHLTEH 
ARQIDSIFSD DVPNMSHMEN KEGIKEA