Gene SeSA_A0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0515 
Symbol 
ID6516422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp520557 
End bp522257 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content56% 
IMG OID642745663 
Productextracellular solute-binding protein, family 5 
Protein accessionYP_002113487 
Protein GI194738291 
COG category[R] General function prediction only 
COG ID[COG4533] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTAC TGAATCGGCT TAATCAATAT CAACGCCTCT GGCAGCCTTC CGCCGGGGAA 
ACGCAACATG TCACCGTTAG CGAACTGGCC GAACGCTGTT TTTGTAGCGA GCGCCATCTG
CGAACGCTGC TGCGTCAGGC CCAGCAGGCA GGTTGGCTAA GATGGGAGGC GCAGTCCGGG
CGCGGGAAAC GTGGACGGCT CCAGTTTCTG GTCACGCCGG AATCGCTCCG CACCGCCATG
ATGGAACAGG CGCTGGAAAA AGGGCAGCAG CTCAACGTAC TGGAACTGGC GCAGCTGGCG
CCTGGCGAGT TACGGGCGAT GCTCCAGCCT TTTATGGGCG GCCAATGGCA AAACGATACG
CCGACATTGC GTATTCCCTA CTATCGTCCG CTTGATCCGC TGCAGCCGGG TTTCCTGCCA
GGACGCGCGG AACAGCATCT CGCAGGGCAA GTTTTTTCCG GGTTAACGCG CTTCGACCGC
GATAGCCAAT ATCCTTGCGG GGATTTGGCG CATCACTGGA AGGTTTCCGC CGACGGTTTA
CGCTGGGATT TTTATATTCG CTCCACGCTG CACTGGCATA ATGGCGATGC GGTGGATACC
GCGCAGCTAC ACGAACGCCT GGAAAGGCTG CTTACCCTAC CCGCGCTAAG CAAATTGTTT
ATTAGCGTCG CACGGATCGA AGTAACGCAT CCTCAGTGCC TGACCTTTCT CCTTCACCGA
CCTGATTACT GGCTGGCGCA TCGTCTGGCG AGCTATTGTA GCGGTCTGGC GCATCCTGAC
CTGCCGCTTA TCGGCACTGG TCCTTTTCGC CTGGCGTTGT TCACGCCGGA ACTGGTGCGT
CTGGAAAGTC ATGACCATTA TCACCTCAGC CATCCGCTGC TGAAAGCGAT TGAATTCTGG
ATCACCCCGC AACTGTTTGC CCAGGATCTG GGCACCAGTT GCCGCCATCC GGTGCAGATT
GCCATCGGCA AACCGGAAGA GCTGGCGACG CTGAGTCAGG TAAGTAGTGG TATCAGCCTT
GGCTTTTGTT ATTTAACCCT CAAAAAGGGC TCACGGCTCA ACGTACAGCA GGCGCGGCGT
CTGATACATA TTATCCATCA TACTTCGCTG CTAAAAACCT TGCCGGTAGA TGAGAACTTG
ATTATGCCAA GTCAGGGGCT ACTACCCGGC TGGACAATCC CGCAATGGCA GGACGTTGAT
GAAACGCCAT TGCCGAAAAA ACTTACCCTG GCGTACCACC TTCCCGTAGA GCTGCATACG
ATGGCGGAAC AGCTTCGACA TTACCTGGCG ACGCTCGGCT GTGAGTTAAC GTTGATTTTT
CATAATGCCA AAAACTGGGA TAACTGCCCT GCGTTGGCGC AAGCGGATCT GATGATGGGC
GACAGGCTGA TCGGCGAAGC GCCGGAATAT ACGCTGGAGC AGTGGCTACG TTGCGATCAG
ATCTGGCCGC ATGTCCTGGA CGCGCCTGCG TTTTCCCATC TGCAGGCTAC GCTTGACGCT
CTGCAAATTC AGCCCAATGA AAAAGATCGC CGCGCCGCGC TACAACAAGT TTTTGCCAAC
CTGATGGATG ACGCCACACT TACGCCGCTG TTTAATTATC ACTATCGCAT CAGCGCCCCA
CCGGGCGTTA ACGGCGTTCG ACTCACCCCT CGCGGCTGGT TTGAATTTAG CGAAGCCTGG
CTTCCGCCGC CTTCGCCGTG A
 
Protein sequence
MRLLNRLNQY QRLWQPSAGE TQHVTVSELA ERCFCSERHL RTLLRQAQQA GWLRWEAQSG 
RGKRGRLQFL VTPESLRTAM MEQALEKGQQ LNVLELAQLA PGELRAMLQP FMGGQWQNDT
PTLRIPYYRP LDPLQPGFLP GRAEQHLAGQ VFSGLTRFDR DSQYPCGDLA HHWKVSADGL
RWDFYIRSTL HWHNGDAVDT AQLHERLERL LTLPALSKLF ISVARIEVTH PQCLTFLLHR
PDYWLAHRLA SYCSGLAHPD LPLIGTGPFR LALFTPELVR LESHDHYHLS HPLLKAIEFW
ITPQLFAQDL GTSCRHPVQI AIGKPEELAT LSQVSSGISL GFCYLTLKKG SRLNVQQARR
LIHIIHHTSL LKTLPVDENL IMPSQGLLPG WTIPQWQDVD ETPLPKKLTL AYHLPVELHT
MAEQLRHYLA TLGCELTLIF HNAKNWDNCP ALAQADLMMG DRLIGEAPEY TLEQWLRCDQ
IWPHVLDAPA FSHLQATLDA LQIQPNEKDR RAALQQVFAN LMDDATLTPL FNYHYRISAP
PGVNGVRLTP RGWFEFSEAW LPPPSP