Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0515 |
Symbol | |
ID | 6516422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 520557 |
End bp | 522257 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642745663 |
Product | extracellular solute-binding protein, family 5 |
Protein accession | YP_002113487 |
Protein GI | 194738291 |
COG category | [R] General function prediction only |
COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTAC TGAATCGGCT TAATCAATAT CAACGCCTCT GGCAGCCTTC CGCCGGGGAA ACGCAACATG TCACCGTTAG CGAACTGGCC GAACGCTGTT TTTGTAGCGA GCGCCATCTG CGAACGCTGC TGCGTCAGGC CCAGCAGGCA GGTTGGCTAA GATGGGAGGC GCAGTCCGGG CGCGGGAAAC GTGGACGGCT CCAGTTTCTG GTCACGCCGG AATCGCTCCG CACCGCCATG ATGGAACAGG CGCTGGAAAA AGGGCAGCAG CTCAACGTAC TGGAACTGGC GCAGCTGGCG CCTGGCGAGT TACGGGCGAT GCTCCAGCCT TTTATGGGCG GCCAATGGCA AAACGATACG CCGACATTGC GTATTCCCTA CTATCGTCCG CTTGATCCGC TGCAGCCGGG TTTCCTGCCA GGACGCGCGG AACAGCATCT CGCAGGGCAA GTTTTTTCCG GGTTAACGCG CTTCGACCGC GATAGCCAAT ATCCTTGCGG GGATTTGGCG CATCACTGGA AGGTTTCCGC CGACGGTTTA CGCTGGGATT TTTATATTCG CTCCACGCTG CACTGGCATA ATGGCGATGC GGTGGATACC GCGCAGCTAC ACGAACGCCT GGAAAGGCTG CTTACCCTAC CCGCGCTAAG CAAATTGTTT ATTAGCGTCG CACGGATCGA AGTAACGCAT CCTCAGTGCC TGACCTTTCT CCTTCACCGA CCTGATTACT GGCTGGCGCA TCGTCTGGCG AGCTATTGTA GCGGTCTGGC GCATCCTGAC CTGCCGCTTA TCGGCACTGG TCCTTTTCGC CTGGCGTTGT TCACGCCGGA ACTGGTGCGT CTGGAAAGTC ATGACCATTA TCACCTCAGC CATCCGCTGC TGAAAGCGAT TGAATTCTGG ATCACCCCGC AACTGTTTGC CCAGGATCTG GGCACCAGTT GCCGCCATCC GGTGCAGATT GCCATCGGCA AACCGGAAGA GCTGGCGACG CTGAGTCAGG TAAGTAGTGG TATCAGCCTT GGCTTTTGTT ATTTAACCCT CAAAAAGGGC TCACGGCTCA ACGTACAGCA GGCGCGGCGT CTGATACATA TTATCCATCA TACTTCGCTG CTAAAAACCT TGCCGGTAGA TGAGAACTTG ATTATGCCAA GTCAGGGGCT ACTACCCGGC TGGACAATCC CGCAATGGCA GGACGTTGAT GAAACGCCAT TGCCGAAAAA ACTTACCCTG GCGTACCACC TTCCCGTAGA GCTGCATACG ATGGCGGAAC AGCTTCGACA TTACCTGGCG ACGCTCGGCT GTGAGTTAAC GTTGATTTTT CATAATGCCA AAAACTGGGA TAACTGCCCT GCGTTGGCGC AAGCGGATCT GATGATGGGC GACAGGCTGA TCGGCGAAGC GCCGGAATAT ACGCTGGAGC AGTGGCTACG TTGCGATCAG ATCTGGCCGC ATGTCCTGGA CGCGCCTGCG TTTTCCCATC TGCAGGCTAC GCTTGACGCT CTGCAAATTC AGCCCAATGA AAAAGATCGC CGCGCCGCGC TACAACAAGT TTTTGCCAAC CTGATGGATG ACGCCACACT TACGCCGCTG TTTAATTATC ACTATCGCAT CAGCGCCCCA CCGGGCGTTA ACGGCGTTCG ACTCACCCCT CGCGGCTGGT TTGAATTTAG CGAAGCCTGG CTTCCGCCGC CTTCGCCGTG A
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Protein sequence | MRLLNRLNQY QRLWQPSAGE TQHVTVSELA ERCFCSERHL RTLLRQAQQA GWLRWEAQSG RGKRGRLQFL VTPESLRTAM MEQALEKGQQ LNVLELAQLA PGELRAMLQP FMGGQWQNDT PTLRIPYYRP LDPLQPGFLP GRAEQHLAGQ VFSGLTRFDR DSQYPCGDLA HHWKVSADGL RWDFYIRSTL HWHNGDAVDT AQLHERLERL LTLPALSKLF ISVARIEVTH PQCLTFLLHR PDYWLAHRLA SYCSGLAHPD LPLIGTGPFR LALFTPELVR LESHDHYHLS HPLLKAIEFW ITPQLFAQDL GTSCRHPVQI AIGKPEELAT LSQVSSGISL GFCYLTLKKG SRLNVQQARR LIHIIHHTSL LKTLPVDENL IMPSQGLLPG WTIPQWQDVD ETPLPKKLTL AYHLPVELHT MAEQLRHYLA TLGCELTLIF HNAKNWDNCP ALAQADLMMG DRLIGEAPEY TLEQWLRCDQ IWPHVLDAPA FSHLQATLDA LQIQPNEKDR RAALQQVFAN LMDDATLTPL FNYHYRISAP PGVNGVRLTP RGWFEFSEAW LPPPSP
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