Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0508 |
Symbol | clpX |
ID | 6515815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 512209 |
End bp | 513480 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642745656 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_002113480 |
Protein GI | 194734820 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.254636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.561664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATA AACGCAAAGA TGGCTCGGGC AAATTGTTGT ACTGCTCTTT TTGCGGCAAA AGCCAGCATG AAGTGCGCAA GCTGATTGCC GGTCCATCCG TGTATATCTG CGACGAATGC GTCGATTTAT GTAACGACAT TATTCGCGAA GAAATTAAAG AAGTTGCTCC GCACCGTGAA CGTAGTGCGC TGCCGACGCC GCATGAAATT CGTACTCACC TGGACGATTA CGTTATCGGC CAGGAGCAGG CGAAAAAAGT GCTGGCGGTG GCGGTCTATA ACCACTACAA GCGTCTGCGT AACGGCGATA CCAGCAATGG CGTCGAGTTA GGCAAAAGCA ACATTCTGCT GATTGGACCG ACCGGCTCCG GTAAAACGCT GCTGGCGGAA ACGCTGGCGC GCTTGCTGGA TGTGCCGTTC ACTATGGCGG ATGCGACCAC GCTGACCGAA GCGGGTTACG TGGGTGAAGA CGTCGAGAAT ATCATTCAGA AACTGTTGCA GAAATGCGAC TACGACGTGC AAAAAGCGCA GCGTGGGATT GTCTACATTG ATGAAATCGA TAAGATTTCG CGTAAATCAG ACAATCCGTC CATTACCCGC GATGTTTCCG GCGAAGGCGT ACAGCAGGCG TTGCTGAAAC TGATCGAAGG CACTGTCGCC GCGGTTCCAC CGCAGGGCGG TCGCAAACAT CCGCAGCAGG AGTTCTTACA GGTAGATACC TCTAAGATTC TGTTTATCTG CGGCGGCGCG TTTGCCGGTC TGGATAAAGT GATCGCTAAC CGTGTTGAAA CCGGCTCCGG CATTGGTTTT GGCGCGACGG TGAAAGCGAA GTCCGACAAA GCCAGCGAAG GCGAGCTGTT GTCGCAGGTT GAACCGGAAG ATTTGATCAA ATTTGGTCTG ATTCCTGAGT TTATCGGTCG TCTGCCAGTG GTGGCGACGT TGAACGAACT CAGCGAAGAA GCGCTGATTC AAATCCTGAA AGAGCCGAAA AATGCGCTGA CCAAGCAGTA TCAGGCGCTG TTTAACCTGG AAGGCGTCGA TCTGGAATTC CGTGACGAAG CGCTGGACGC TATCGCCAGG AAAGCAATGG CGCGTAAAAC CGGTGCCCGT GGTCTGCGTT CTATCGTCGA AGCGGCGCTG CTGGATACCA TGTACGATTT GCCATCTATG GAAGACGTCG AAAAAGTGGT GATCGACGAG TCCGTTATTG CCGGTCAGAG TAAGCCGTTG CTGATTTACG GCAAACCGGA AGCGCAGGCT TCTGGCGAAT AA
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Protein sequence | MTDKRKDGSG KLLYCSFCGK SQHEVRKLIA GPSVYICDEC VDLCNDIIRE EIKEVAPHRE RSALPTPHEI RTHLDDYVIG QEQAKKVLAV AVYNHYKRLR NGDTSNGVEL GKSNILLIGP TGSGKTLLAE TLARLLDVPF TMADATTLTE AGYVGEDVEN IIQKLLQKCD YDVQKAQRGI VYIDEIDKIS RKSDNPSITR DVSGEGVQQA LLKLIEGTVA AVPPQGGRKH PQQEFLQVDT SKILFICGGA FAGLDKVIAN RVETGSGIGF GATVKAKSDK ASEGELLSQV EPEDLIKFGL IPEFIGRLPV VATLNELSEE ALIQILKEPK NALTKQYQAL FNLEGVDLEF RDEALDAIAR KAMARKTGAR GLRSIVEAAL LDTMYDLPSM EDVEKVVIDE SVIAGQSKPL LIYGKPEAQA SGE
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