Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0500 |
Symbol | cyoB |
ID | 6518316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 503314 |
End bp | 505305 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642745649 |
Product | cytochrome o ubiquinol oxidase subunit I |
Protein accession | YP_002113473 |
Protein GI | 194736449 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0037262 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.500568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGAA AATTATCACT GGATGCAGTA CCGTTCCATG AACCTATCGT CATGGTAACG ATCGCTGCAA TTATCGTCGG GGGACTGGCG ATACTGGCAG CGATTACTTA CTTCGGTAAG TGGACCTACC TATGGAAAGA GTGGTTAACG TCAGTTGACC ATAAACGCCT CGGCATCATG TATATCATCG TCGCGATTGT GATGCTGTTA CGTGGTTTCG CCGATGCCAT CATGATGCGT AGCCAGCAGG CGCTTGCCTC CGCCGGCGAA GCGGGTTTTC TACCGCCGCA CCACTACGAT CAGATCTTTA CCGCTCACGG CGTAATCATG ATCTTCTTCG TGGCGATGCC CTTCGTTATC GGTCTGATGA ACCTGGTGGT TCCGCTGCAG ATCGGCGCGC GCGACGTTGC GTTCCCTTTC CTGAACAACC TGAGCTTCTG GTTCACCGTT GTCGGCGTTA TCCTGGTTAA CCTCTCGCTG GGCGTGGGTG AATTCGCTCA GACCGGCTGG CTGGCTTATC CGCCGCTATC GGGAATAGAG TACAGTCCCA GCGTAGGGGT CGATTACTGG ATATGGGCGT TACAACTCTC GGGTATTGGT ACGACGTTAA CCGGTATCAA CTTCTTCGTG ACGATCCTGA AGATGCGTGC GCCGGGTATG ACAATGTTCA AGATGCCGGT CTTTACCTGG GCCTCTTTGT GCGCCAACGT ACTGATCATC GCCTCTTTCC CGATTCTGAC GGTTACCGTC GCGTTGCTGA CCCTGGATCG CTATCTGGGC ACCCATTTCT TTACCAACGA TATGGGCGGC AACATGATGA TGTACATCAA CCTGATTTGG GCCTGGGGCC ATCCGGAAGT GTACATTCTG ATTCTGCCGG TCTTCGGGGT ATTCTCCGAA ATCGCAGCGA CCTTCTCGCG TAAACGTCTG TTCGGCTATA CCTCGCTGGT TTGGGCGACC GTCTGTATTA CCGTACTGTC GTTTATCGTT TGGCTGCACC ACTTCTTCAC GATGGGTGCG GGCGCGAACG TTAACGCCTT CTTCGGTATC ACCACCATGA TTATCGCCAT CCCGACCGGG GTGAAGATCT TCAACTGGTT GTTCACCATG TATCAGGGCC GTATTGTCTT CCATTCCGCA ATGATGTGGA CCATCGGCTT TATCGTGACC TTCTCGGTCG GCGGTATGAC CGGCGTGCTG CTGGCGGTAC CGGGCGCGGA CTTCGTCCTG CACAACAGTC TGTTCCTGAT TGCGCACTTC CATAACGTGA TCATCGGCGG CGTGGTGTTT GGCTGCTTCG CGGGTATGAC CTACTGGTGG CCGAAGGCGT TTGGCTTCAA GCTGAACGAA ACCTGGGGTA AACGCGCCTT CTGGTTCTGG ATTATCGGTT TCTTTGTAGC CTTTATGCCG CTGTACGTCC TGGGCTTCAT GGGCATGACC CGTCGCCTCA GCCAGCAAAT TGATCCGCAG TTCCATACGA TGCTGATGGT TGCCGCCGCC GGTGCCGCGC TGATTGCGCT GGGTATCCTG TGCCAACTGA TTCAGATCTT CGTTTCTATT CGCGACCGCG ATCAGAACCG CGATCTGACT GGCGACCCAT GGGGTGGCCG TACGCTGGAG TGGTCAACCT CTTCTCCGCC GCCGTTCTAT AACTTTGCCG TTGTGCCGCA CGTTCACGAA CGTGACGCCT TCTGGGAAAT GAAAGAAAAA GGCGAAGCGT ACCAACAGCC TGGACAGTAT GAAGAGATTC ATATGCCGAA AAATAGCGGT GCCGGTATTG TTATCGCCGC CTTCGCGACG GTATTTGGCT TCGCCATGAT CTGGCATATC TGGTGGCTGG CGATAGTGGG TTTCGCAGGC ATGATCATCA GCTGGATTGT AAAAAGCTTT GATGAAGATG TGGATTACTA CGTGCCGGTC CCGGAAGTCG AAAAACTGGA AAACCAGCAT TTCGATGAGA TTACTAAGGC AGGGCTGAAA AATGGCAACT GA
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Protein sequence | MFGKLSLDAV PFHEPIVMVT IAAIIVGGLA ILAAITYFGK WTYLWKEWLT SVDHKRLGIM YIIVAIVMLL RGFADAIMMR SQQALASAGE AGFLPPHHYD QIFTAHGVIM IFFVAMPFVI GLMNLVVPLQ IGARDVAFPF LNNLSFWFTV VGVILVNLSL GVGEFAQTGW LAYPPLSGIE YSPSVGVDYW IWALQLSGIG TTLTGINFFV TILKMRAPGM TMFKMPVFTW ASLCANVLII ASFPILTVTV ALLTLDRYLG THFFTNDMGG NMMMYINLIW AWGHPEVYIL ILPVFGVFSE IAATFSRKRL FGYTSLVWAT VCITVLSFIV WLHHFFTMGA GANVNAFFGI TTMIIAIPTG VKIFNWLFTM YQGRIVFHSA MMWTIGFIVT FSVGGMTGVL LAVPGADFVL HNSLFLIAHF HNVIIGGVVF GCFAGMTYWW PKAFGFKLNE TWGKRAFWFW IIGFFVAFMP LYVLGFMGMT RRLSQQIDPQ FHTMLMVAAA GAALIALGIL CQLIQIFVSI RDRDQNRDLT GDPWGGRTLE WSTSSPPPFY NFAVVPHVHE RDAFWEMKEK GEAYQQPGQY EEIHMPKNSG AGIVIAAFAT VFGFAMIWHI WWLAIVGFAG MIISWIVKSF DEDVDYYVPV PEVEKLENQH FDEITKAGLK NGN
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