Gene SeSA_A0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0412 
Symbol 
ID6517126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp421548 
End bp422951 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content55% 
IMG OID642745564 
Productcytochrome bd-II oxidase subunit 1 
Protein accessionYP_002113388 
Protein GI194736276 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.534696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000241042 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTTTG ATGCATTCTT TTTAGCGAGA CTCCAGTTTG CCTTTACCGT CTCTTTTCAT 
ATTATTTTCC CCGCGATTAC GATTGGCTTA GCCAGTTACC TGGTGGTACT GGAGGGTTTA
TGGCTAAAAA CGCGTAATCC TGTCTGGCGC TCGCTCTATC AGTTCTGGCT CAAAATTTTT
GCCGTCAACT TCGGGATGGG CGTGGTCTCC GGTCTGGTCA TGGCTTACCA GTTCGGAACG
AACTGGAGCG GTTTCTCCCA GTTCGCCGGC AGTATCACCG GGCCTTTATT AACCTATGAA
GTGCTCACCG CATTCTTCCT GGAAGCGGGA TTCTTAGGCG TGATGCTTTT TGGCTGGAAC
AAAGTCGGGC CGGGCCTGCA TTTCTTGTCT ACCTGTATGG TGGCGTTGGG CACGTTAATG
TCGACGTTCT GGATTCTGGC GTCTAACAGC TGGATGCATA CCCCGCAGGG ATTTGAAATT
CACAACGGTC AGGTGGTCCC GGTGGACTGG TTCGCGGTGA TTTTCAACCC GTCGTTCCCG
TATCGCCTGT TGCATATGTC CGTTGCGGCG TTTTTAAGTA GCGCGATGTT TGTCGGCGCG
TCCGCTGCCT GGCATTTACT GAAAGGTAAC GATACGCCGG CTATCCGCCG TATGTTCTCG
ATGGCGTTAT GGATGGCGGT CGTGGTGGCG CCCGTTCAGG CATTGATTGG CGATATGCAC
GGCCTTAATA CCCTGAAGCA TCAGCCGGTC AAAATCGCCG CGATTGAGGG GCACTGGGAA
AATACGCCCG GCGAGCCAAC GCCGCTTACG CTGGTAGGCT GGCCGGATAT GGAGGCGGAA
CGGACCCGCT ATGCGCTTGA GATCCCGGCG TTGGGCAGTC TGATCCTGAC GCATAGCCTG
GACAAACAGG TGCCTGCGCT AAAAGATTAT CCCAAAGAGG ATCGCCCCAA CTCTACCGTG
GTGTTCTGGT CTTTCCGTCT GATGGTGGGC ATGGGTGTAC TGATGATCTT CCTGGGGCTG
GCCAGCCTGT GGCTACGCTA CCGACGCCGA CTGTATCATT CGCGGCCCTT TATGCACTTT
GCGCTGTGGA TGGGGCCGTC CGGGCTTATC GCCATCCTTG CCGGATGGGT GACGACTGAA
GTAGGACGTC AGCCGTGGGT GGTCTATGGC CTGCTGCGAA CGCGTGATGC GGTTTCCGCG
CACAGCACCT TGCAGATGAG CATCAGTTTG CTGGCCTTCT TTGTGGTCTA TTCCCTGGTC
TTTGGGGTTG GCTATATTTA TATGATTCGC CTTATCCAGA AAGGGCCGCA GCCGGCGGAG
ACACCGACCG CTGAAACCGA TGGCAGACCA GCGCGTCCTA TCTCTGCCGT GGGAGAATCG
CTTGAGCAGG AGAAATGCGA ATGA
 
Protein sequence
MEFDAFFLAR LQFAFTVSFH IIFPAITIGL ASYLVVLEGL WLKTRNPVWR SLYQFWLKIF 
AVNFGMGVVS GLVMAYQFGT NWSGFSQFAG SITGPLLTYE VLTAFFLEAG FLGVMLFGWN
KVGPGLHFLS TCMVALGTLM STFWILASNS WMHTPQGFEI HNGQVVPVDW FAVIFNPSFP
YRLLHMSVAA FLSSAMFVGA SAAWHLLKGN DTPAIRRMFS MALWMAVVVA PVQALIGDMH
GLNTLKHQPV KIAAIEGHWE NTPGEPTPLT LVGWPDMEAE RTRYALEIPA LGSLILTHSL
DKQVPALKDY PKEDRPNSTV VFWSFRLMVG MGVLMIFLGL ASLWLRYRRR LYHSRPFMHF
ALWMGPSGLI AILAGWVTTE VGRQPWVVYG LLRTRDAVSA HSTLQMSISL LAFFVVYSLV
FGVGYIYMIR LIQKGPQPAE TPTAETDGRP ARPISAVGES LEQEKCE