Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0313 |
Symbol | |
ID | 6517465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 322122 |
End bp | 323465 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642745474 |
Product | type VI secretion protein, family |
Protein accession | YP_002113299 |
Protein GI | 194735441 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.471816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGGA ATGACCGCGT AGTCTGGAGT GAAGGACAAT TTTTACTGCC GCAGATGTTT CAGCAGCAAG AGCGTTATCT GGAACACGTC ATGCATTACC GCAGCCTGCC GCTGACCCCC TTTTTCTGGG GATTCAGCCA CTACAATATT GATGGCGAAG CGCTGAACAT CGGTAAACTG ATACTGAAAG AGGCATCAGG GATTTTTCCT GACGGTACGC CGTTTAACGC ACCGGACCAT ACCCCGCTGC CGCCGCCGCT GACCATCCTG CCGGAGCACC TGAACCAGCA GATTTGTCTG GCGGTACCGG TACGCGCGCC GAACAGCGAA GAAACTACGT TTGACAATAA CCCGGAATCA CTGGCGCGTT TCTCGGTACA CGAACACGAC ATCCGCGACG CCAACTCGCT GGGACGTGGC GCGCAGTTAT TACAGCTCAG TCACCTGCGC CTGCGGCTGC TGCCGGAAAA GGCGGTGACG GGCGCCTGGA TTGGCCTGCC GCTGACCCGC ATCATCGGGC TGAATCCTGA CGGGCGGATA GATATCGACC ACGACCTGAT CCCGCCCATC ATTAATTATC AGGCCAGTTC ACTGATGTGT ACCTGGCTGT CGTGGATCAA CGATCTCATC CGGATGCGGG CCGATTCGCT GGCGGAACGG CTGACCGGCA GCGACAACCA CGGCCATGAA GCAGCGGAGG TCTCCGATTA CCTGCTGTTG CAAATTCTCA ATCGCTTTGA GCCGCTGTTG ATTCACCTGG CGAAAACCCC GCTGGCCCCG GAAGTGTTGT ATCGCTACCT GTCCGAACTG GCCGGGGAAC TCTCCACCTA TGTGCGTCCA CAAACGCGAC GGCCCGCTGA ATACAAAGAG TACAAACACC TGACGCCCTA TGCCGGGTTG AAATCACTGG TTGATGAGGT GCAGTTCCTG CTGAATGCAG TACTGATCCG GGGCGCGCAG CGCATCGAGC TGAAAGAGGG GACTTACGGC ATCCTGAATG CGGTGGTGGC TCCTTCCGAT CTTGCCGATT TCAGCACGCT GGTACTGGCG ATAAAGGCTT CAATGCCGAC CGATGTGCTA CTGCAACATT TTGCCGCCCA GACCAAAATC GGGCCATCCG ATCGCCTGCC GGAACTGATC CGCTCGCATC TGCCGGGGCT GGCTTTGCAG GTTTTGCCTG TACCACCGCG CCAAATCCCG TTTCAGGCCG GATACATCTA TTACGACATC CGCCGCGAGG GAGCATTGTG GGAACACATT GCCCGTTACG GCGGGATGGC CATGCATACC GCCGGGGAAT TTCCGGGGCT GGAGACAGAA CTGTGGGGAG TGCGCGATAA ATGA
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Protein sequence | MSWNDRVVWS EGQFLLPQMF QQQERYLEHV MHYRSLPLTP FFWGFSHYNI DGEALNIGKL ILKEASGIFP DGTPFNAPDH TPLPPPLTIL PEHLNQQICL AVPVRAPNSE ETTFDNNPES LARFSVHEHD IRDANSLGRG AQLLQLSHLR LRLLPEKAVT GAWIGLPLTR IIGLNPDGRI DIDHDLIPPI INYQASSLMC TWLSWINDLI RMRADSLAER LTGSDNHGHE AAEVSDYLLL QILNRFEPLL IHLAKTPLAP EVLYRYLSEL AGELSTYVRP QTRRPAEYKE YKHLTPYAGL KSLVDEVQFL LNAVLIRGAQ RIELKEGTYG ILNAVVAPSD LADFSTLVLA IKASMPTDVL LQHFAAQTKI GPSDRLPELI RSHLPGLALQ VLPVPPRQIP FQAGYIYYDI RREGALWEHI ARYGGMAMHT AGEFPGLETE LWGVRDK
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