| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0297 |
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| Symbol | |
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| ID | 6517902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 307730 |
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| End bp | 308725 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642745458 |
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| Product | type VI secretion protein, family |
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| Protein accession | YP_002113283 |
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| Protein GI | 194736246 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.267723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.456236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCG CTCTCGACCA GGCGCAGAAA ACCCCATGGC GTTACGGATT CCTGAACCTG
ATGCGGCGCG TGGATGCCCA GCTCTGTGAT ACTCCGGCAG GCAGTATCTG GCAGCCACGG
ATGGAAAAAT TCCGTCTGGG ACAGACGCCG ACGATGACCT TTGCGCCACG GGAAATCGCC
CAGGTCAGCT GGCTGGATGG ACGCCTGCAC CTGAGCCTGT ACAGCCTCGG ACTGTGGGGG
CCAAACGGCC CGTTGCCGCT GCACTATACC GAGCTGGCGC TAAATCGCTC AGAGAGCCGT
CACGATCCGA CGCTGGTTCA TTTTTCCAAT ATTTTTCACC ACCGCTGGCT GACGCAGTTC
TGGCAGGCAT GGCGCAGCGG CCAGTCCGCT GGTGGCGGGC TGGACAAACC GGAACACGAC
CGTTTTGCGT TTTATATCGC CAGTCTCAGC GGGCAGGATC TACGGGAAAG CGCCGAAAGC
CCGCTGTCAG ATCATGTTCG CCTGGCAGCC TCCGCTCATC TGGTACGCGA ATCGCGCAAT
CCTGACGGGC TGGCCGCCAC GCTGGCGCAC TATTTCAGCG TACCTTTTGC GGTGAAAGAG
TTCGCCCTGC ACTGGATAAC GGTGGCGAAC GATGAAATCA CCCGTCTGGG CACGCCCGCG
CAGTCTTCGG TGCTGGGCAA CGGGGCGCTT ATCGGCCAGG CCGTACCGGA TATGCAGTAC
AAATTCCGGC TAATTATCGG CCCGCTCACG CTGGAGGATT ACCTGCGTTT TCTGCCCGGC
GGCAACAATT TGCCCGTGCT GACAGAACTG GTGCGTACGT TCATCGGTTT TGAACATTGC
TGGGAGATTG AACTGCAGTT AAAGCCTCAT GCCGCACCGC CTGCGGTGAT CGGCGGCGCG
CAGCAGCTTG GCTGGACGGC CTGGGCAGGT AAAGCCATGC ATGACCGTCC GGTGACCGGC
ATGATTTTTG AACCTGAACA CGGCTTAACC CACTGA
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| Protein sequence | MTGALDQAQK TPWRYGFLNL MRRVDAQLCD TPAGSIWQPR MEKFRLGQTP TMTFAPREIA
QVSWLDGRLH LSLYSLGLWG PNGPLPLHYT ELALNRSESR HDPTLVHFSN IFHHRWLTQF
WQAWRSGQSA GGGLDKPEHD RFAFYIASLS GQDLRESAES PLSDHVRLAA SAHLVRESRN
PDGLAATLAH YFSVPFAVKE FALHWITVAN DEITRLGTPA QSSVLGNGAL IGQAVPDMQY
KFRLIIGPLT LEDYLRFLPG GNNLPVLTEL VRTFIGFEHC WEIELQLKPH AAPPAVIGGA
QQLGWTAWAG KAMHDRPVTG MIFEPEHGLT H
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