Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0297 |
Symbol | |
ID | 6517902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 307730 |
End bp | 308725 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642745458 |
Product | type VI secretion protein, family |
Protein accession | YP_002113283 |
Protein GI | 194736246 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.267723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.456236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCG CTCTCGACCA GGCGCAGAAA ACCCCATGGC GTTACGGATT CCTGAACCTG ATGCGGCGCG TGGATGCCCA GCTCTGTGAT ACTCCGGCAG GCAGTATCTG GCAGCCACGG ATGGAAAAAT TCCGTCTGGG ACAGACGCCG ACGATGACCT TTGCGCCACG GGAAATCGCC CAGGTCAGCT GGCTGGATGG ACGCCTGCAC CTGAGCCTGT ACAGCCTCGG ACTGTGGGGG CCAAACGGCC CGTTGCCGCT GCACTATACC GAGCTGGCGC TAAATCGCTC AGAGAGCCGT CACGATCCGA CGCTGGTTCA TTTTTCCAAT ATTTTTCACC ACCGCTGGCT GACGCAGTTC TGGCAGGCAT GGCGCAGCGG CCAGTCCGCT GGTGGCGGGC TGGACAAACC GGAACACGAC CGTTTTGCGT TTTATATCGC CAGTCTCAGC GGGCAGGATC TACGGGAAAG CGCCGAAAGC CCGCTGTCAG ATCATGTTCG CCTGGCAGCC TCCGCTCATC TGGTACGCGA ATCGCGCAAT CCTGACGGGC TGGCCGCCAC GCTGGCGCAC TATTTCAGCG TACCTTTTGC GGTGAAAGAG TTCGCCCTGC ACTGGATAAC GGTGGCGAAC GATGAAATCA CCCGTCTGGG CACGCCCGCG CAGTCTTCGG TGCTGGGCAA CGGGGCGCTT ATCGGCCAGG CCGTACCGGA TATGCAGTAC AAATTCCGGC TAATTATCGG CCCGCTCACG CTGGAGGATT ACCTGCGTTT TCTGCCCGGC GGCAACAATT TGCCCGTGCT GACAGAACTG GTGCGTACGT TCATCGGTTT TGAACATTGC TGGGAGATTG AACTGCAGTT AAAGCCTCAT GCCGCACCGC CTGCGGTGAT CGGCGGCGCG CAGCAGCTTG GCTGGACGGC CTGGGCAGGT AAAGCCATGC ATGACCGTCC GGTGACCGGC ATGATTTTTG AACCTGAACA CGGCTTAACC CACTGA
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Protein sequence | MTGALDQAQK TPWRYGFLNL MRRVDAQLCD TPAGSIWQPR MEKFRLGQTP TMTFAPREIA QVSWLDGRLH LSLYSLGLWG PNGPLPLHYT ELALNRSESR HDPTLVHFSN IFHHRWLTQF WQAWRSGQSA GGGLDKPEHD RFAFYIASLS GQDLRESAES PLSDHVRLAA SAHLVRESRN PDGLAATLAH YFSVPFAVKE FALHWITVAN DEITRLGTPA QSSVLGNGAL IGQAVPDMQY KFRLIIGPLT LEDYLRFLPG GNNLPVLTEL VRTFIGFEHC WEIELQLKPH AAPPAVIGGA QQLGWTAWAG KAMHDRPVTG MIFEPEHGLT H
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