Gene SeSA_A0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0290 
SymbolmltD 
ID6515396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp301930 
End bp303150 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content52% 
IMG OID642745451 
Productmembrane-bound lytic murein transglycosylase D 
Protein accessionYP_002113277 
Protein GI194734347 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.720037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG GAACGTCTAT CGCGCCAGAT CAGGACTTGT GGGCTTTCAT TGGCGACGAG 
CTAAAGATGG GAATTCCGGA AAACAGCCGG ATTCGCGAAC AGAAACAGAA GTATTTACGC
AATAAGAGCT ATCTCCACGA TGTAACTTTA CGGGCAGAGC CGTATATGTA CTGGATAGCG
GGGCAGGTTA AGAAACGTAA CATGCCTATG GAGCTGGTAC TACTACCCAT AGTGGAGAGC
GCTTTTGATC CTCACGCAAC GTCTGGCGCC AATGCCGCAG GCATCTGGCA GATCATACCG
AGCACAGGGC GCAATTATGG TTTAAAGCAG ACCCGTAATT ATGACGCGCG TCGCGATGTT
GTGGCCTCTA CGACCGCCGC GTTAGACATG ATGCAGCGTC TGAACAAAAT GTTTGACGGC
GACTGGCTGT TAACCGTTGC AGCGTATAAC AGCGGCGAAG GCCGTGTTAT GCGGGCAATT
AAAGCAAACA AAGCGCGTGG AAAACCAACG GATTTCTGGT CGCTTTCTTT GCCCAGGGAA
ACAAAACTCT ACGTACCTAA GATGCTGGCA TTGAGTGAAA TTCTCAAAAA CAGCAAACGC
TACGGCGTAC GTCTGCCAAC AACAGATGAA AGCCGAGCGC TGGCTCGAGT TCGTTTAAAC
AGTCCAGTTG AAATGGCCCA GGTTGCGGAT ATGGCGGGCA TGTCTATCAG CAAGCTGAAG
ACGTTTAATG CCGGTGTAAA AGGGTCTACC TTAGGCGTAA GCGGTCCGCA ATATGTTATG
GTGCCCAAAA AGCATGCCGA GCAGTTGCGT GAGTCGCTGG CTTCCGGTGA GATTGACGCC
GTTCAGTCCC AACTGATCGC CGACAATACG CCGTTGAATA GCCGTAGCTA TAAGGTGCGC
TCTGGCGATA CGCTTTCCGG TATTGCTTCG CGGCTTGGCG TAAGCACGAA GGACTTGCAG
CAGTGGAACA ATCTGCGTGG TTCGCGCCTG AAAATCGGGC AAAGCCTGAC CGTGGGCGCT
GGCAGCAGCG CGCAACGACT GGCAAACAAT AGCGATAGCA TTACCTATCG TGTCCGTAAA
GGCGATTCGC TTTCCAGTAT CGCCAGACGT CACGGGGTGA ATATCAAAGA TGTGATGCGC
TGGAACCATG ATACGGATAA TCTACAACCG GGCGATCAGC TTACGTTGTT TGTGAAGGAC
AATAGCACGC CAGACTCCTG A
 
Protein sequence
MDDGTSIAPD QDLWAFIGDE LKMGIPENSR IREQKQKYLR NKSYLHDVTL RAEPYMYWIA 
GQVKKRNMPM ELVLLPIVES AFDPHATSGA NAAGIWQIIP STGRNYGLKQ TRNYDARRDV
VASTTAALDM MQRLNKMFDG DWLLTVAAYN SGEGRVMRAI KANKARGKPT DFWSLSLPRE
TKLYVPKMLA LSEILKNSKR YGVRLPTTDE SRALARVRLN SPVEMAQVAD MAGMSISKLK
TFNAGVKGST LGVSGPQYVM VPKKHAEQLR ESLASGEIDA VQSQLIADNT PLNSRSYKVR
SGDTLSGIAS RLGVSTKDLQ QWNNLRGSRL KIGQSLTVGA GSSAQRLANN SDSITYRVRK
GDSLSSIARR HGVNIKDVMR WNHDTDNLQP GDQLTLFVKD NSTPDS