Gene SeSA_A0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0261 
Symbol 
ID6516039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp278445 
End bp280586 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content52% 
IMG OID642745425 
Productlysine decarboxylase, constitutive 
Protein accessionYP_002113257 
Protein GI194735478 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.658449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.265457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TCGCCATTAT GGGGCCGCAC GGGGTTTATT ATAAAGATGA ACCCATCAAG 
GAGCTTGAGC GTGCATTACA ATCCCTGGGA TTTCAAATTA TCTGGCCGCA AAATAGCGTT
GACTTGTTGA AGTTTATTGA ACATAACCCG CGCATCTGCG GCGTTATTTT TGACTGGGAT
GAATACAGTC TCGACCTTTG TAGCGAAATC AACCAGTTAA ATGAATACCT TCCTCTCTAC
GCCTTTATCA ATACCAACTC CACGCTGGAC GTTAGCGTTC ACGATATGCG CATGGCGCTG
TGGTTTTTTG AGTATGCATT GGGGCTGGCT GAAGATATCG CGACACGCAT TCATCAATAT
ACAAACGAAT ATCTCGATAA TATTACGCCG CCGTTTACCA AAGCGCTGTT TACCTACGCC
AAAGAAGGAA AATATACCTT TTGTACGCCG GGTCATATGG CGGGAACGGC GTATCAGAAA
AGCCCGCCAG GCTGTTTGTT TTATGACTTT TTTGGCGGCA ATACCTTAAA AGCTGATGTG
TCGATTTCGG TGACTGAACT GGGATCGCTG CTGGATCACA CCGGACCGCA TCTGGAAGCG
GAAGAGTATA TCGCCCGTAC TTTTGGCGCC GAGCAGAGTT ATATGGTGAC GAACGGTACG
TCGACCTCGA ATAAAATTGT CGGTATGTAT GCCGCGCCTG CGGGAAGTAC GCTACTTATT
GATCGTAATT GCCATAAATC GCTGGCGCAT TTGCTGATGA TGAGCGATGT GGTGCCTCTC
TGGTTGAAGC CGACGCGCAA TGCGCTCGGT ATTCTCGGCG GTATTCCTAA GCGTGAATTT
ACCTGCGACA GCATTGCGCG TAAGGTGGCG GAAACCGCGC AGGCGCAATG GCCGGTTCAT
GCGGTTATCA CCAATTCGAC TTACGATGGT CTGCTGTATA ACACTAACTG GATCAAGCAG
ATGCTGGACG TTCCCTCGAT CCATTTTGAT TCCGCCTGGG TACCCTATAC CCATTTCCAT
CCGATCTACC AGGGGAAAAG CGGGATGAGC GGCGATCGGG TGCCCGGAAA AGTGATTTTC
GAAACGCAAT CCACCCATAA AATGCTGGCG GCTTTTTCGC AGGCGTCGCT TATTCATATC
AAAGGGGAAT ATGACGAAGA GACGTTTAAC GAAGCGTTTA TGATGCACAC TTCCACATCG
CCGAGCTATC CCATTGTCGC CTCTATCGAG ACCGCGGCGG CGATGCTGCG CGGCAATCCA
GGGAAAAGAT TGATTAATCG TTCGGTGGAG CGGGCGCTCC ATTTTCGTAA AGAGGTACAG
CGGTTACGTG AAGAGTCCGA TAGCTGGTTC TTTGATATCT GGCAGCCGGA AGAGGTTGAT
GAGGCCGAAT GCTGGCCGGT AACGCCGGGA GAAACCTGGC ATGGCTTCAC CGATGCCGAT
GACGATCATA TGTTCCTCGA TCCGGTTAAG GTGACAATCC TGACGCCGGG GATGGATGAA
CAGGGCAACA TGAGCGAAGA GGGGATACCC GCCGCGCTGG TGGCGAAGTT CCTCGATGAG
CGAGGCGTGG TGGTGGAAAA AACCGGGCCG TATAATTTGC TGTTTTTGTT CAGCATAGGG
ATTGATAAGA CCCGTGCGAT GGGGCTGCTG CGCGGGCTGA CGGAATTTAA ACGGGCCTAC
GATCTTAACC TGCGCGTCAA AAATATGTTG CCGGATCTGT ATGCGGAAGA TCCGGATTTT
TATCGCAATA TGCGCATTCA GGATCTGGCG CAGGGGATCC ATAAACTGAT CCGCCAGCAC
GATCTTCCGG GGCTGATGTT GCGGGCGTTC GAGGTTTTAC CGGAGATGAT CATGACCCCG
CACCAGGCCT GGCAGCGTCA GATCAAAGGC GAGGTGGAAA CCGTGGCGCT CGATCAACTG
CCAGGGCGCG TTTCCGCGAA TATGATCCTG CCTTATCCGC CAGGCGTTCC GCTGTTGATG
CCCGGCGAGA GGATCACGCA ACAGAGTCGG GCCGTGCTCG ATTTTCTGCT AATGCTCTGC
TCGATTGGCC AGCATTATCC CGGTTTTGAA ACGGATATTC ACGGCGCGAA ACGGAATGAA
GACGGGGTGT ACCAGGTACG AGTCTTAAAA CACGCCTGTT AG
 
Protein sequence
MNIIAIMGPH GVYYKDEPIK ELERALQSLG FQIIWPQNSV DLLKFIEHNP RICGVIFDWD 
EYSLDLCSEI NQLNEYLPLY AFINTNSTLD VSVHDMRMAL WFFEYALGLA EDIATRIHQY
TNEYLDNITP PFTKALFTYA KEGKYTFCTP GHMAGTAYQK SPPGCLFYDF FGGNTLKADV
SISVTELGSL LDHTGPHLEA EEYIARTFGA EQSYMVTNGT STSNKIVGMY AAPAGSTLLI
DRNCHKSLAH LLMMSDVVPL WLKPTRNALG ILGGIPKREF TCDSIARKVA ETAQAQWPVH
AVITNSTYDG LLYNTNWIKQ MLDVPSIHFD SAWVPYTHFH PIYQGKSGMS GDRVPGKVIF
ETQSTHKMLA AFSQASLIHI KGEYDEETFN EAFMMHTSTS PSYPIVASIE TAAAMLRGNP
GKRLINRSVE RALHFRKEVQ RLREESDSWF FDIWQPEEVD EAECWPVTPG ETWHGFTDAD
DDHMFLDPVK VTILTPGMDE QGNMSEEGIP AALVAKFLDE RGVVVEKTGP YNLLFLFSIG
IDKTRAMGLL RGLTEFKRAY DLNLRVKNML PDLYAEDPDF YRNMRIQDLA QGIHKLIRQH
DLPGLMLRAF EVLPEMIMTP HQAWQRQIKG EVETVALDQL PGRVSANMIL PYPPGVPLLM
PGERITQQSR AVLDFLLMLC SIGQHYPGFE TDIHGAKRNE DGVYQVRVLK HAC