| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0178 |
|---|
| Symbol | acnB |
|---|
| ID | 6516154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 185714 |
|---|
| End bp | 188311 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642745346 |
|---|
| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|---|
| Protein accession | YP_002113178 |
|---|
| Protein GI | 194735261 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1049] Aconitase B |
|---|
| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00695763 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGAAG AATACCGTAA GCACGTAGCT GAGCGTGCTG CCCAGGGGAT TGTGCCAAAA
CCTTTAGACG CAACCCAAAT GGCTGCGCTT GTCGAGCTGC TGAAGACCCC GCCTGTGGGC
GAAGAAGAAT TCCTGTTAGA CCTGTTGATC AACCGCGTTC CTCCTGGCGT AGATGAAGCC
GCTTATGTTA AAGCCGGTTT TCTCGCTGCT GTCGCGAAAG GCGACACCAC CTCCCCGCTG
GTCTCCCCAG AAAAAGCCAT TGAACTGCTG GGCACCATGC AGGGTGGTTA CAACATTCAT
CCGCTGATTG ATGCGCTGGA CGATGCGAAA CTGGCGCCGA TTGCGGCCAA AGCGCTGTCC
CACACCCTGC TGATGTTCGA TAACTTCTAC GACGTAGAAG AGAAAGCCAA AGCGGGCAAC
GAATATGCCA AACAGGTGAT GCAATCCTGG GCCGACGCCG AATGGTTCCT GAGCCGTCCG
CCGCTGGCGG AAAAAATCAC CGTCACTGTT TTCAAAGTGA CCGGCGAAAC GAATACCGAC
GATCTCTCTC CGGCGCCGGA TGCGTGGTCG AGACCGGATA TCCCGTTACA TGCGCAGGCG
ATGCTGAAAA ACGCCCGTGA AGGCATTGAG CCGGATCAGC CAGGCGTTGT TGGCCCCATC
AAACAAATCG AAGCATTGCA GAAAAAAGGC TACCCGCTGG CCTACGTGGG TGACGTGGTG
GGCACCGGTT CTTCCCGTAA ATCCGCGACC AACTCCGTGC TGTGGTTCAT GGGCGATGAC
ATCCCGAACG TGCCGAACAA GCGCGGCGGC GGTCTGTGCC TCGGCGGCAA AATTGCGCCT
ATCTTCTTTA ACACTATGGA AGATGCGGGC GCACTGCCGA TTGAAGTTGA CGTTTCTAAC
CTGAATATGG GCGATGTGAT TGACGTCTAC CCGTACAAAG GCGAAGTGCG CAACCACGAA
ACCGGCGAGC TACTGGCAAC CTTCGAACTG AAAACCGACG TGCTGATCGA CGAAGTACGC
GCCGGTGGCC GTATTCCGCT GATTATCGGT CGTGGCCTGA CCACCAAAGC GCGTGAAGCG
CTGGGTCTGC CGCACTCTGA TGTTTTCCGT CAGGCGAAAG ACGTGGCAGA AAGCAGCCGT
GGCTTCTCTC TGGCGCAGAA AATGGTCGGT CGCGCCTGCG GCGTGAAAGG TATCCGTCCG
GGCGCGTACT GCGAACCGAA AATGACCTCC GTCGGTTCTC AGGATACTAC TGGCCCGATG
ACCCGCGATG AGCTGAAAGA CCTGGCCTGT CTGGGATTCT CCGCCGATCT GGTCATGCAG
TCGTTCTGTC ACACCGCAGC CTATCCGAAG CCGGTTGACG TCACCACGCA CCACACGCTG
CCGGACTTCA TTATGAACCG TGGCGGTGTC TCTCTGCGTC CGGGCGACGG CGTTATCCAC
TCCTGGCTGA ACCGTATGCT GCTGCCGGAC ACCGTGGGGA CCGGCGGCGA CTCCCATACC
CGTTTCCCGA TCGGCATCTC CTTCCCGGCG GGATCTGGCC TGGTGGCATT TGCTGCCGCG
ACCGGCGTGA TGCCGCTGGA TATGCCGGAA TCCGTGCTGG TGCGCTTCAA AGGCAAAATG
CAGCCGGGCA TCACCCTGCG CGATCTGGTA CACGCCATTC CGCTGTACGC CATCAAACAG
GGCCTGCTGA CCGTTGAGAA GAAAGGCAAG AAAAACATCT TCTCTGGCCG CATTCTGGAA
ATTGAAGGTC TGCCGGATCT GAAAGTTGAG CAGGCATTTG AGCTGACCGA TGCGTCCGCC
GAGCGTTCCG CGGCAGGCTG TACCATCAAG CTGAACAAAG AGCCGATCAT TGAATACCTG
ACCTCCAACA TCGTCCTGCT GAAGTGGATG ATTGCGGAAG GCTACGGCGA CCGTCGTACG
CTGGAACGTC GTATTCAGGG TATGGAAAAA TGGCTGGCGG ACCCGCAACT GCTGGAAGCC
GATGCTGACG CGGAATACGC GGCAGTGATC GACATCGATC TGGCGGATAT CAAAGAGCCA
ATCCTGTGTG CGCCGAACGA TCCGGACGAC GCGCGTCTGC TGTCTGACGT GCAGGGCGAG
AAGATCGACG AAGTGTTCAT CGGCTCCTGC ATGACCAACA TCGGCCACTT CCGTGCCGCC
GGTAAGCTGC TGGATAACCA CAAAGGCCAG TTGCCAACCC GCCTGTGGGT AGCGCCGCCA
ACCCGTATGG ACGCCGCGCA GCTCACCGAA GAAGGTTACT ACAGTGTGTT CGGTAAGAGC
GGTGCGCGTA TCGAAATTCC AGGCTGCTCT CTGTGCATGG GTAACCAGGC GCGTGTAGCC
GACGGCGCAA CGGTGGTGTC GACCTCTACC CGTAACTTCC CGAACCGTTT AGGTACCGGG
GCGAACGTCT ACCTGGCTTC TGCGGAGCTG GCGGCGGTGG CGGCGCTTAT CGGCAAACTG
CCGACGCCGG AAGAGTACCA GACCTTTGTG GCGCAGGTGG ATAAGACGGC GGTGGATACT
TACCGTTATC TGAACTTCGA CCAGCTCTCT CAGTACACTG AGAAAGCGGA CGGCGTGATT
TTCCAGACTG CGGTGTAA
|
|---|
| Protein sequence | MLEEYRKHVA ERAAQGIVPK PLDATQMAAL VELLKTPPVG EEEFLLDLLI NRVPPGVDEA
AYVKAGFLAA VAKGDTTSPL VSPEKAIELL GTMQGGYNIH PLIDALDDAK LAPIAAKALS
HTLLMFDNFY DVEEKAKAGN EYAKQVMQSW ADAEWFLSRP PLAEKITVTV FKVTGETNTD
DLSPAPDAWS RPDIPLHAQA MLKNAREGIE PDQPGVVGPI KQIEALQKKG YPLAYVGDVV
GTGSSRKSAT NSVLWFMGDD IPNVPNKRGG GLCLGGKIAP IFFNTMEDAG ALPIEVDVSN
LNMGDVIDVY PYKGEVRNHE TGELLATFEL KTDVLIDEVR AGGRIPLIIG RGLTTKAREA
LGLPHSDVFR QAKDVAESSR GFSLAQKMVG RACGVKGIRP GAYCEPKMTS VGSQDTTGPM
TRDELKDLAC LGFSADLVMQ SFCHTAAYPK PVDVTTHHTL PDFIMNRGGV SLRPGDGVIH
SWLNRMLLPD TVGTGGDSHT RFPIGISFPA GSGLVAFAAA TGVMPLDMPE SVLVRFKGKM
QPGITLRDLV HAIPLYAIKQ GLLTVEKKGK KNIFSGRILE IEGLPDLKVE QAFELTDASA
ERSAAGCTIK LNKEPIIEYL TSNIVLLKWM IAEGYGDRRT LERRIQGMEK WLADPQLLEA
DADAEYAAVI DIDLADIKEP ILCAPNDPDD ARLLSDVQGE KIDEVFIGSC MTNIGHFRAA
GKLLDNHKGQ LPTRLWVAPP TRMDAAQLTE EGYYSVFGKS GARIEIPGCS LCMGNQARVA
DGATVVSTST RNFPNRLGTG ANVYLASAEL AAVAALIGKL PTPEEYQTFV AQVDKTAVDT
YRYLNFDQLS QYTEKADGVI FQTAV
|
|---|
| |