Gene SeSA_A0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0171 
SymbolaceE 
ID6516571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp176127 
End bp178790 
Gene Length2664 bp 
Protein Length887 aa 
Translation table11 
GC content54% 
IMG OID642745339 
Productpyruvate dehydrogenase subunit E1 
Protein accessionYP_002113171 
Protein GI194737204 
COG category[C] Energy production and conversion 
COG ID[COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component 
TIGRFAM ID[TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC GTTTCCCAAA TGACGTGGAT CCGATCGAAA CTCGCGACTG GCTACAGGCG 
ATCGAATCGG TCATCCGTGA AGAAGGTGTT GAGCGCGCTC AGTATCTGAT TGACCAACTG
CTTTCTGAAG CTCGCAAAGG CGGCGTGAAA GTCGCGGCAG GCGCAGGGGC CAGTAATTAC
ATCAACACTA TTGCCGTTGA AGACGAACCG GAATACCCGG GCAATCTGGA GCTGGAACGT
CGCATTCGTT CTGCGATCCG CTGGAACGCC ATCATGACCG TGCTGCGTGC GTCTAAAAAA
GACCTTGAGT TGGGCGGCCA CATGGCGTCC TTCCAGTCTT CCGCCACGAT CTATGATGTC
TGTTTCAACC ATTTCTTCCG TGCGCGCAAC GAACAGGATG GCGGCGACCT GGTTTACTTC
CAGGGCCACA TCTCTCCGGG CATCTACGCT CGCGCGTTCC TGGAAGGTCG TCTGACCCAG
GAACAGATGG ATAACTTCCG TCAGGAAGTT CACGGCAATG GCCTCTCTTC CTATCCGCAC
CCGAAACTGA TGCCGGAATT CTGGCAGTTC CCGACCGTCT CTATGGGGCT GGGCCCAATC
GGTGCTATCT ACCAGGCGAA ATTCCTGAAA TATCTGGAAC ACCGTGGCCT GAAAGATACC
TCTAAACAGA CCGTTTACGC CTTCCTCGGC GACGGCGAGA TGGATGAGCC GGAATCCAAA
GGCGCGATCA CCATCGCCAC CCGTGAAAAA CTGGACAACC TGGTCTTTGT TATCAACTGT
AACCTGCAGC GTCTTGACGG CCCGGTCACC GGTAACGGCA AGATTGTTAA CGAACTGGAA
GGCATCTTTG CAGGTGCTGG CTGGAACGTT ATTAAAGTCA TGTGGGGCGG TCGTTGGGAT
GAGCTGCTGC GTAAAGACAC CAGCGGTAAA CTGATCCAGC TGATGAACGA AACCGTTGAC
GGCGACTACC AGACCTTCAA ATCCAAAGAC GGCGCTTACG TGCGTGAGCA CTTCTTCGGT
AAATACCCGG AAACCGCAGC GCTGGTGGCC GACTGGACCG ATGAGCAGAT TTGGGCGCTG
AACCGTGGTG GTCACGATCC GAAGAAAGTT TACGCGGCAC TGAAAAAAGC GCAGGAAACC
AAAGGCAAAG CGACCGTAAT CCTGGCCCAT ACCATTAAAG GTTACGGCAT GGGTGACACC
GCGGAAGGTA AAAACATCGC TCACCAGGTT AAGAAAATGA ACATGGACGG CGTGCGTTAC
GTCCGCGATC GTTTCAACGT GCCGGTTGCC GATGCTGATC TCGAAAAACT GCCGTACATT
ACCTTCCCGG AAGGTTCTGA AGAACACAAA TACCTGCATG AACGTCGTCA GGCGCTGCAT
GGCTACCTGC CAAGCCGTCA GCCGAACTTC ACCGAGAAGT TAGAGCTGCC TCAACTTTCA
GATTTCGGCG CGCTGCTGGA AGAGCAAAGC AAAGAGATTT CCACTACGAT CGCTTTCGTG
CGTGCCCTGA ACGTGATGCT GAAGAACAAG TCGATCAAAG ATCGCCTGGT TCCGATCATC
GCCGACGAAG CGCGTACTTT CGGTATGGAA GGTCTGTTCC GTCAGATTGG TATCTACAGC
CCGAACGGCC AGCAGTACAC CCCGCAGGAC CGTGAGCAGG TTGCTTACTA CAAAGAAGAC
GAGAAAGGCC AGATTCTGCA GGAAGGTATC AACGAGCTGG GCGCAGGCGC ATCCTGGCTG
GCTGCGGCGA CCTCTTACAG CACCAACGAT CTGCCGATGA TCCCGTTCTA CATCTACTAT
TCCATGTTCG GGTTCCAGCG TATCGGCGAC CTGTGCTGGC AGGCTGGCGA CCAGCAGGCT
CGCGGCTTCC TGATCGGCGG GACTTCCGGT CGTACAACGC TGAACGGCGA AGGTCTGCAG
CACGAAGATG GTCACAGCCA TATTCAGTCG CTGACTATCC CGAACTGTAT CTCTTACGAC
CCGGCTTACG CTTACGAAGT GGCTGTCATC ATGCATGATG GTCTGGAGCG TATGTACGGT
GAGAAACAAG AGAACGTTTA CTACTACATC ACCACCCTGA ACGAAAACTA CCACATGCCG
GCCATGCCAG CAGGTGCCGA GGAAGGTATC CGTAAAGGTA TCTACAAACT CGAAACCCTT
GAAGGTAGCA AAGGTAAAGT TCAGCTGCTG GGCTCCGGTT CTATCCTGCG TCATGTGCGT
GAAGCAGCAC AGATCCTGGC GAAAGACTAC GGCGTAGGTT CTGACGTGTA CAGCGTAACC
TCCTTCACCG AACTGGCGCG TGATGGTCAG GATTGTGAGC GCTGGAACAT GCTGCACCCG
CTGGAAACCC CGCGCGTTCC GTACATCGCT CAGGTGATGA ACGACGCTCC GGCAGTGGCA
TCTACTGACT ATATGAAACT GTTCGCCGAG CAGGTTCGTA CTTACGTACC GGCTGACGAC
TATCGCGTAC TGGGTACGGA TGGCTTCGGT CGTTCCGACA GCCGTGAGAA CCTGCGTCAC
CACTTCGAAG TTGATGCTTC TTATGTGGTT GTTGCAGCGC TGGGCGAACT GGCTAAACGT
GGCGAAATCG ACAAGAAAGT GGTAGCGGAT GCGATTACCA AATTCAACAT CGATGCAGAT
AAAGTTAACC CGCGTCTGGC GTAA
 
Protein sequence
MSERFPNDVD PIETRDWLQA IESVIREEGV ERAQYLIDQL LSEARKGGVK VAAGAGASNY 
INTIAVEDEP EYPGNLELER RIRSAIRWNA IMTVLRASKK DLELGGHMAS FQSSATIYDV
CFNHFFRARN EQDGGDLVYF QGHISPGIYA RAFLEGRLTQ EQMDNFRQEV HGNGLSSYPH
PKLMPEFWQF PTVSMGLGPI GAIYQAKFLK YLEHRGLKDT SKQTVYAFLG DGEMDEPESK
GAITIATREK LDNLVFVINC NLQRLDGPVT GNGKIVNELE GIFAGAGWNV IKVMWGGRWD
ELLRKDTSGK LIQLMNETVD GDYQTFKSKD GAYVREHFFG KYPETAALVA DWTDEQIWAL
NRGGHDPKKV YAALKKAQET KGKATVILAH TIKGYGMGDT AEGKNIAHQV KKMNMDGVRY
VRDRFNVPVA DADLEKLPYI TFPEGSEEHK YLHERRQALH GYLPSRQPNF TEKLELPQLS
DFGALLEEQS KEISTTIAFV RALNVMLKNK SIKDRLVPII ADEARTFGME GLFRQIGIYS
PNGQQYTPQD REQVAYYKED EKGQILQEGI NELGAGASWL AAATSYSTND LPMIPFYIYY
SMFGFQRIGD LCWQAGDQQA RGFLIGGTSG RTTLNGEGLQ HEDGHSHIQS LTIPNCISYD
PAYAYEVAVI MHDGLERMYG EKQENVYYYI TTLNENYHMP AMPAGAEEGI RKGIYKLETL
EGSKGKVQLL GSGSILRHVR EAAQILAKDY GVGSDVYSVT SFTELARDGQ DCERWNMLHP
LETPRVPYIA QVMNDAPAVA STDYMKLFAE QVRTYVPADD YRVLGTDGFG RSDSRENLRH
HFEVDASYVV VAALGELAKR GEIDKKVVAD AITKFNIDAD KVNPRLA