| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0122 |
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| Symbol | sgrR |
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| ID | 6515461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 126790 |
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| End bp | 128448 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642745295 |
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| Product | transcriptional regulator SgrR |
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| Protein accession | YP_002113127 |
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| Protein GI | 194735782 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.40957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00940564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCCTCAG GTCGCCTGCA ACAACAATTT ATCCGTCTCT GGCAATGTTG TGACGGTAAA
ACGCAAGACA CCACGCTTAA TGAGCTGGCG GATCTGCTGA ACTGTTCGCG TCGCCATATG
CGTACGCTGC TAAATACGAT GCAGGCGCGC GGTTGGCTAA CATGGGAAGC CGAGGTTGGA
CGCGGAAAGC GTTCGCGTCT GACGTTCCTG TATACCGGAC TGGCGCTGCA ACAGCAGCGG
GCGGAAGACC TGCTGGAACA AGATCGAATC GATCAACTGG TACAACTGGT CGGCGATAAA
AGCGCTGTCA GGCAAATGCT GATTTCCCAT CTGGGACGCA GCTTCCGCCA GGGGCGGCAT
ATTCTGCGGG TTCTTTACTA TCGTCCGATG CACAATCTCC TGCCGGGAAC CGCATTACGT
CGCTCGGAAA CCCATATTGC CCGGCAAATT TTCAGTTCGC TCACGCGGGT AAATGAGGAA
AACGGGGAAC TGGAAGCGGA CATTGCGCAC CACTGGCAGC AAATTTCCCC TTTACTGTGG
CGCTTCTACC TGCGCCCCGG CATTCATTTT CATCATGGCC GCGAGCTGGA GATGGAAGAT
GTCATCGCCT CGCTGACGCG TATCAATACG CTTCCACTTT ACTCGCACAT CACAAAGATA
GACTCCCCTA CCGCGTGGAC GCTGGATATT CATCTTTCCC AGCCGGATCG TTGGTTGCCG
TGGCTGCTGG GCCAGGTCCC GGCGATGATT TTGCCGCGGG AGTGGGAAAC GCTGGCTAAT
TTCGCCAGCC ACCCTATCGG CACCGGGCCT TATGCCGTGC GGCGTAATAC GCCGAACCAA
CTCAAGATAC TCGCCTTTGA TGACTACTTC GGCTATCGAG CGTTAATAGA CGAAGTGAAC
GTCTGGGTAC TGCCGGATAT CAGTGAAGAA CCGGCCTGCG GCTTGATGCT GGAAGGGCCG
ATACAAGGCG GTGAAAAAGC GATAGAAAGC CGACTGGAAG AGGGGTGCTA TTACCTGCTA
TTCGACGCCA GAACGCCGCG CGGCGCGCAT CCGCAGGTCA GAGAATGGGT AAGCCACGTC
CTCTCCCCCA CCAATTTACT CTATCATGCC GATGAACCGC TACAGCAGCT CTGGTTCCCG
GCCTATGGGC TTTTACCGCG CTGGCATCAC GCCCGTCCAG GCCCGGGCGA AAAACCCGCC
GGTCTGGAAA CCCTCACGCT GACCTTCTAT CGCGAACACA TTGAGCACCG GGTTATCGCC
CGTATCATGA GCGCGCTTCT GGCTGAACAT CAGGTGCATT TGCATATTCA GGAGATCGAC
TACGATCAAT GGCACGCCGG CGAGATCGAA AGCGATATCT GGCTCAATAG CGCTAACTTT
ACGCTGCCGC TGGATTTCTC GCTGTTCGCG CACCTGTGCG AAGTACCGCT CTTGCAGAAC
TGCATTCCGC GCGACTGGCA GGACGACGCC GCACAGTGGC GCGCTGGCGA GATGAACCTG
GCGAACTGGT GCCAGCAACT GCTGGCCAAC AAAGCGATTG TGCCGCTGAT CCACCACTGG
CTGATTATCC AGGGACAGCG CAGTATGCGC GGGCTGCGCA TGAATACCCT CGGCTGGTTT
GATTTTAAAT CGGCGTGGTT TGCGCCGCCA GATCCTTAA
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| Protein sequence | MPSGRLQQQF IRLWQCCDGK TQDTTLNELA DLLNCSRRHM RTLLNTMQAR GWLTWEAEVG
RGKRSRLTFL YTGLALQQQR AEDLLEQDRI DQLVQLVGDK SAVRQMLISH LGRSFRQGRH
ILRVLYYRPM HNLLPGTALR RSETHIARQI FSSLTRVNEE NGELEADIAH HWQQISPLLW
RFYLRPGIHF HHGRELEMED VIASLTRINT LPLYSHITKI DSPTAWTLDI HLSQPDRWLP
WLLGQVPAMI LPREWETLAN FASHPIGTGP YAVRRNTPNQ LKILAFDDYF GYRALIDEVN
VWVLPDISEE PACGLMLEGP IQGGEKAIES RLEEGCYYLL FDARTPRGAH PQVREWVSHV
LSPTNLLYHA DEPLQQLWFP AYGLLPRWHH ARPGPGEKPA GLETLTLTFY REHIEHRVIA
RIMSALLAEH QVHLHIQEID YDQWHAGEIE SDIWLNSANF TLPLDFSLFA HLCEVPLLQN
CIPRDWQDDA AQWRAGEMNL ANWCQQLLAN KAIVPLIHHW LIIQGQRSMR GLRMNTLGWF
DFKSAWFAPP DP
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