Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0075 |
Symbol | carB |
ID | 6519720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 77040 |
End bp | 80267 |
Gene Length | 3228 bp |
Protein Length | 1075 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642745250 |
Product | carbamoyl phosphate synthase large subunit |
Protein accession | YP_002113082 |
Protein GI | 194735374 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAAC GTACAGATAT AAAAAGCATC CTGATTCTGG GCGCGGGCCC GATTGTTATC GGTCAGGCGT GTGAGTTTGA CTACTCCGGC GCTCAGGCGT GTAAAGCGCT GCGCGAAGAG GGTTACCGCG TCATTCTGGT GAACTCCAAC CCGGCCACCA TCATGACCGA CCCGGAAATG GCCGATGCCA CCTACATCGA GCCGATTCAC TGGGAAGTGG TGCGCAAAAT CATTGAAAAA GAGCGTCCGG ATGCGGTGCT GCCGACCATG GGCGGCCAGA CGGCGCTGAA CTGCGCGCTG GAGCTGGAGC GGCAGGGCGT GCTCGAAGAG TTCGGCGTCA CCATGATTGG CGCCACCGCC GACGCCATTG ATAAAGCCGA AGACCGTCGT CGCTTCGATA TCGCGATGAA GAAAATTGGT CTCGACACCG CGCGTTCCGG TATCGCGCAC ACTATGGAAG AAGCGCTGGC GGTTGCCGCT GATGTGGGCT TCCCGTGCAT CATCCGTCCG TCCTTTACCA TGGGCGGCAC CGGTGGCGGT ATCGCTTACA ACCGTGAAGA GTTCGAAGAA ATCTGCGAAC GCGGTCTGGA CCTCTCGCCA ACCAACGAGC TGCTGATTGA TGAATCGCTG ATCGGCTGGA AAGAGTACGA GATGGAAGTG GTGCGTGATA AAAACGACAA CTGCATCATC GTCTGCTCTA TCGAAAACTT CGACGCAATG GGTATCCATA CTGGGGACTC GATCACCGTG GCCCCGGCAC AGACGCTGAC CGACAAAGAA TACCAAATCA TGCGTAACGC CTCGATGGCG GTACTGCGTG AAATCGGCGT CGAAACTGGC GGTTCTAACG TCCAGTTCGC AGTAAACCCG AAAAACGGTC GTCTGATCGT TATCGAAATG AACCCGCGCG TCTCCCGCTC CTCGGCGCTG GCGTCGAAAG CCACCGGTTT CCCGATTGCC AAAGTGGCCG CCAAACTGGC GGTGGGTTAT ACCCTCGACG AGCTGATGAA CGACATCACC GGTGGCCGTA CACCGGCCTC CTTCGAGCCG TCTATCGACT ACGTTGTCAC CAAAATTCCG CGCTTTAACT TCGAGAAATT CGCCGGTGCC AACGACCGTC TGACCACCCA GATGAAATCG GTTGGTGAAG TGATGGCGAT TGGCCGCACG CAGCAGGAAT CCCTGCAAAA AGCGCTGCGC GGCCTGGAAG TGGGCGCTAC CGGCTTCGAC CCGAAAGTCA GCCTCGACGA CCCGGAAGCG CTGACTAAAA TCCGCCGCGA GCTGAAAGAC GCGGGCGCTG ATCGTATCTG GTATATCGCC GATGCCTTCC GCGCAGGTCT CTCCGTTGAC GGGGTGTTCA ACTTGACCAA CATCGACCGC TGGTTCCTGG TGCAGATTGA AGAGCTGGTG CGTCTGGAAG AGAAAGTGGC TGAAGTCGGG ATTACCGGCC TCAACGCCGA CTTCCTGCGT CAGCTCAAGC GCAAAGGTTT TGCCGATGCG CGTCTGGCGA AACTGGCGGG CGTGCGCGAG GCGGAAATCC GCAAGCTACG CGACCAGTAT GACCTGCACC CGGTCTACAA GCGTGTGGAT ACCTGCGCGG CGGAATTCGC CACCGATACC GCCTATATGT ACTCCACTTA TGAAGATGAG TGCGAAGCGA ACCCGTCCGT TGATCGCGAT AAAATCATGG TCCTCGGCGG CGGCCCGAAC CGTATCGGCC AGGGCATCGA ATTTGACTAC TGCTGCGTAC ACGCCTCGCT GGCGCTGCGC GAAGACGGTT ACGAAACCAT TATGGTCAAC TGTAACCCGG AAACCGTCTC CACCGACTAC GACACTTCCG ACCGTCTGTA CTTCGAGCCG GTGACGCTGG AAGACGTGCT GGAAATCGTG CGCATCGAGA AGCCGAAAGG CGTTATCGTG CAGTACGGCG GCCAGACGCC GCTGAAGCTG GCGCGCGCGC TGGAAGCGGC AGGCGTGCCG GTTATCGGCA CCAGCCCGGA CGCCATCGAC CGCGCGGAAG ACCGTGAACG CTTCCAGCAT GCGGTTGACC GTCTGAAGCT GAAGCAACCG GCCAACGCCA CCGTCACCGC CATTGAACAA GCGGTTGAGA AGGCGAAAGA AATTGGCTAC CCGCTGGTGG TACGTCCTTC TTACGTGCTG GGCGGTCGGG CGATGGAAAT TGTCTACGAC GAAGCCGACC TGCGTCGCTA CTTCCAGACC GCAGTCAGCG TCTCTAACGA TGCGCCGGTA CTGCTGGACC GCTTCCTTGA TGATGCGGTT GAAGTGGACG TGGACGCTAT CTGCGACGGC GAAATGGTGC TGATTGGCGG CATCATGGAG CACATCGAGC AGGCTGGCGT ACACTCCGGC GACTCCGCCT GTTCCCTGCC GGCCTACACG CTGAGCCAGG AAATTCAAGA CGTGATGCGC CAGCAGGTGC AGAAGCTGGC TTTCGAGTTG CAGGTGCGCG GCCTGATGAA CGTGCAGTTT GCGGTGAAAG ACAACGAAGT CTATCTGATT GAAGTCAACC CGCGTGCGGC GCGTACCGTA CCGTTCGTCT CCAAAGCCAC CGGCGTGCCG CTGGCGAAAG TAGCGGCGCG CGTGATGGCC GGCAAATCGC TGACCGAGCA GGGCGTGACC CAAGAAATTA TCCCGCCGTA CTACTCGGTG AAAGAAGTGG TGCTGCCGTT CAACAAATTC CCCGGCGTTG ACCCGCTGTT AGGGCCAGAA ATGCGCTCTA CCGGGGAAGT GATGGGCGTC GGTCGTACCT TCGCGGAAGC GTTCGCCAAG GCACAGTTGG GCAGTAACTC CACGATGAAG AAACAGGGCC GTGCGCTGCT CTCCGTTCGC GAAGGCGACA AAGAGCGCGT GGTGGATCTC GCGGCCAAGC TGCTGAAACA GGGCTTTGAG CTGGATGCCA CTCACGGTAC GGCGATTGTG CTGGGCGAAG CCGGTATCAA CCCGCGTCTG GTGAACAAGG TGCACGAAGG TCGTCCGCAC ATTCAGGACC GCATCAAGAA TGGCGAATAT ACCTATATCA TCAATACCAC CGCAGGCCGC CGCGCGATTG AAGACTCCAG GGTGATTCGT CGTAGCGCGC TGCAGTATAA AGTGCATTAT GACACCACGC TGAACGGCGG TTTTGCAACG ACGATGGCGC TCAATGCCGA TGCCACCGAG AAGGTAACCT CGGTGCAGGA AATGCACGCG CAGATCAAAA AGTCGTAA
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Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM ADATYIEPIH WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLEE FGVTMIGATA DAIDKAEDRR RFDIAMKKIG LDTARSGIAH TMEEALAVAA DVGFPCIIRP SFTMGGTGGG IAYNREEFEE ICERGLDLSP TNELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENFDAM GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFAVNP KNGRLIVIEM NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELMNDIT GGRTPASFEP SIDYVVTKIP RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA LTKIRRELKD AGADRIWYIA DAFRAGLSVD GVFNLTNIDR WFLVQIEELV RLEEKVAEVG ITGLNADFLR QLKRKGFADA RLAKLAGVRE AEIRKLRDQY DLHPVYKRVD TCAAEFATDT AYMYSTYEDE CEANPSVDRD KIMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN CNPETVSTDY DTSDRLYFEP VTLEDVLEIV RIEKPKGVIV QYGGQTPLKL ARALEAAGVP VIGTSPDAID RAEDRERFQH AVDRLKLKQP ANATVTAIEQ AVEKAKEIGY PLVVRPSYVL GGRAMEIVYD EADLRRYFQT AVSVSNDAPV LLDRFLDDAV EVDVDAICDG EMVLIGGIME HIEQAGVHSG DSACSLPAYT LSQEIQDVMR QQVQKLAFEL QVRGLMNVQF AVKDNEVYLI EVNPRAARTV PFVSKATGVP LAKVAARVMA GKSLTEQGVT QEIIPPYYSV KEVVLPFNKF PGVDPLLGPE MRSTGEVMGV GRTFAEAFAK AQLGSNSTMK KQGRALLSVR EGDKERVVDL AAKLLKQGFE LDATHGTAIV LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIINTTAGR RAIEDSRVIR RSALQYKVHY DTTLNGGFAT TMALNADATE KVTSVQEMHA QIKKS
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