Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0046 |
Symbol | |
ID | 6517825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 48371 |
End bp | 50410 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642745221 |
Product | glycoside hydrolase, family 31 |
Protein accession | YP_002113053 |
Protein GI | 194737987 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.39622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCATTTA TGCAACAAGA CCCGCGTCGT CTGGTCTGGC AGCAAAACGA TCGCTATTTA TGGATTGAAC CCTGGGGCGA GAACAGCCTG CGCGTACGCA GCGGCCGTCA TCTGCCGGTA ATGAGAAATG AAGACTGGGC ATTGACTGAG CCAGTCGCAG AAAGTCAGTG CCACATTGAT TATGAGCACC ACCAGGCAAC GCTGACCAAC GGCAAAATTA TCGCTATCGT CAATCAAAAA GGACAAGTTA CCTTTTACCG CCATCCACAC AAACCCCTGT TGCAGGAGTT CTGGCGCCTG CGGGGCGAAA TTGGCGAGGA TGAATCATCT CACGGCCAGT ACGTCAGCGC ACTCAACCTT GAGGGACGCG AGTTCCGCCC TATTCAGGGT GGGAAATATT CACTGAAAGC CCGCTTCGAA GCCACCGAAG GGGAAAAAAT TTATGGTATG GGGCAGTATC AACAGGCCAA CCTGGATCTC AAAGGATGCG TGCTTGAGCT GGCGCAACGT AACTCCCAGG CCTCAGTACC GTTTATGCTC TCCAGTCTGG GCTACGGATT TTTATGGAAC AATCCGGCAG TCGGACGCGT AACCTTTGCC CAAAACGTTA CCGAATGGGA AGCGCAGGTC AGCGAACAGC TGGACTACTG GATCACGGCT GGCGATACCC CGGCAGAAAT TAGCCGGGCT TACGCGCTGG CTACCGGCAC ACCGCCGATG ATGCCGGACT ACGCCATGGG CTTCTGGCAG TGCAAACTCC GTTATCGCAC GCAGGAAGAG CTGCTGGAGG TCGCCCGCGA ATATAAGCGT CGCAATCTGC CTATCTCAGT GATCGTTATC GACTTCTTTC ACTGGCCGAA TCAGGGTGAC TGGATGTTCG ATGCGCGCGA CTGGCCCGAT CCTGATGCCA TGATTGCCGA GCTGAAATCG CTGGGAATTG AGCTGATGGT CTCCGTCTGG CCGACGGTAG ATAACCGTAC CGAAAGCTAT CGGGAGATGC GCGAAAACGG CTGGCTGGTA CAAACGGAAC GTGGCTTGCC GATCAATATG GATTTCCTCG GCAATACCAC TTACTTTGAT GCGACTCATC CGGGCGCGCG CGACTACGTC TGGGGCAAAG CCAAACGCAA CTATTACGAT AAAGGCGTGA AGCTATTCTG GTTAGATGAA GCCGAACCTG AGTTCAGCGT TTACGACTAC GACAACTATC GCTACCACGC CGGGCCGGTA CTGGAAGTGG GCAATATCTA CCCACGTATG TACGCTAAAA CCTTTTTTGA CGGCATGAAA GCCGATGGCG AAGACCAGGT TATCAACCTG CTACGCTGCG CCTGGGCCGG CAGTCAGAAG TACGGCGCGC TGGTCTGGTC AGGTGATATT CACTCCTCGT TTAGATCGCT ACGCAACCAG TTTGCCGCCG GACTCAATAT GGGAATCGCG GGGATACCGT GGTGGACGAC GGATATCGGC GGTTTTCATG GCGGTAATAT TCACGATCCG AAATTCCATG AATTGCTGAT TCGCTGGTTC CAGTGGGGCG TCTTTAGCCC GGTGATGCGT CTGCACGGCA ACCGCGATCC GCAGATTTTA CCCGCACAAC CGTACCGGGA TGGTATCGCC CAGTGCCCGA CCGGCGCACC GAACGAAGTC TGGAGCTACG GTGAGGAAGT ATGCGACGTA CTGACAGGTT GCCTGGCGTT GCGAGAAAAA CTCAAGCCCT ATATCAAAGC GCTGATGGAG GAAACCCATA AGCACAATAC GCCAGTGATG CGCCCCCTGT TCTTTGAATT CCCCGAACAG GAAACAAGTT GGGCAATCAC CGACCAGTAT TGTTTTGGTC CTGACCTGCT GATCGCCCCC GTCATGCATG AAGGTATGCG CGAACGTGAT ATCTGGCTAC CGGAAGGGGA AACATGGACG GATCTTGCGA CCGGTGAAAG CTATTCAGGA GGGCAAACAC TGCAGTACGC TACGCCACTG AACAGAATTC CGGTGTTTAT CCGCGAAGGT GGGCAGTACC GCAGCCTACT GAATTTGTAG
|
Protein sequence | MPFMQQDPRR LVWQQNDRYL WIEPWGENSL RVRSGRHLPV MRNEDWALTE PVAESQCHID YEHHQATLTN GKIIAIVNQK GQVTFYRHPH KPLLQEFWRL RGEIGEDESS HGQYVSALNL EGREFRPIQG GKYSLKARFE ATEGEKIYGM GQYQQANLDL KGCVLELAQR NSQASVPFML SSLGYGFLWN NPAVGRVTFA QNVTEWEAQV SEQLDYWITA GDTPAEISRA YALATGTPPM MPDYAMGFWQ CKLRYRTQEE LLEVAREYKR RNLPISVIVI DFFHWPNQGD WMFDARDWPD PDAMIAELKS LGIELMVSVW PTVDNRTESY REMRENGWLV QTERGLPINM DFLGNTTYFD ATHPGARDYV WGKAKRNYYD KGVKLFWLDE AEPEFSVYDY DNYRYHAGPV LEVGNIYPRM YAKTFFDGMK ADGEDQVINL LRCAWAGSQK YGALVWSGDI HSSFRSLRNQ FAAGLNMGIA GIPWWTTDIG GFHGGNIHDP KFHELLIRWF QWGVFSPVMR LHGNRDPQIL PAQPYRDGIA QCPTGAPNEV WSYGEEVCDV LTGCLALREK LKPYIKALME ETHKHNTPVM RPLFFEFPEQ ETSWAITDQY CFGPDLLIAP VMHEGMRERD IWLPEGETWT DLATGESYSG GQTLQYATPL NRIPVFIREG GQYRSLLNL
|
| |