Gene SeSA_A0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0034 
Symbol 
ID6515694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp34380 
End bp34817 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content36% 
IMG OID642745209 
Productputative transcription regulator 
Protein accessionYP_002113041 
Protein GI194735987 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.373461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.126602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTT ATTTAATTAA CAGCACGCAC ACTTACAATG ATAAGACCAA TGAGCTAAAA 
AACATAAAAA CGGGAAAGAT GATAAAAATT GCCGCAATGC GTATAAAGTG TCTGGAATAT 
ATGCTGAATC ACGCGCAACA AGAGATTATT TATAAAAAAC AGCTCACTAA TGAACTTTGG 
GGGGAAAGAA GTCAATTTAT CAGCGACGCC AATCTGACCC AGATTTTATA TCTACTGCGG 
CGCGACCTTA AAGGCTTTGG CCTGAGCCAG TTTTTTTCCA CGGTGCCCCG AACTGGTATT 
AAAGTTGATG CTAACATTAT TATCAGCAAT GAAAATAAAA ACCATCCCTC TTCTTTAAAA 
AAAGAAGGGT ATAAATATAT GGCATTACTT TTCGCTTTAC TGACCATGGT CATAATGGTT 
ATTTATTCAA TACGATAA
 
Protein sequence
MTIYLINSTH TYNDKTNELK NIKTGKMIKI AAMRIKCLEY MLNHAQQEII YKKQLTNELW 
GERSQFISDA NLTQILYLLR RDLKGFGLSQ FFSTVPRTGI KVDANIIISN ENKNHPSSLK 
KEGYKYMALL FALLTMVIMV IYSIR