Gene SeSA_A0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0033 
Symbol 
ID6515801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp33368 
End bp34372 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content39% 
IMG OID642745208 
Productputative transcriptional regulator 
Protein accessionYP_002113040 
Protein GI194734337 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.408975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0813593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCAA TAAAAAATGC TAAAAAAATT GACTACAATC TGATCAAAGT ATTCGATACG 
GTTATTACTG AAGGAAATGC AACCAGGGCG GCGAGGAAAC TGGATGTCAC GCCTGCGGCG 
ATCTCTCAGG CTCTTCTTCG CTTACAAAAT CTTTATGGCG AAGAGTTATT TATCAGAACC 
CGCAAAGGAT TAGTCCCGTC CAGCAAAGGT AAATCGCTCC ACCAGGTATT TCGCCAGGCA 
ATTGAATCTA TAGAAAACAC ACTTTGCGAT AAAACAGATG CTCAGGAGAG TAATGAACTC 
ATTGTTCTGG GGAGTGATAT CACTGAAAAT TACTATTTTC CGGCGTTGCT GGATATGATG 
TTGGTGAATC GATATATTAT TAAACACTAT GCGATTAAAA AAACAGGGGA ATACTCGCCA 
GCCTCCATGC TGACGCATGG TTATGCGGAT GTCATCATGG GAATTCTGGA TATTAAGAGT 
GAGATGATCG AAAGTTATCT TATTGATAAT TTATCTGATT TTGTTTGTGT TTGTGGTGAA 
AAAAGTCCAT TGGTTGGGCT TGAAAAAATT TCTTTATATA ATTTTTATGC TGCCAGACAT 
GCTGTCTATC ATTCAGATAT GTTCTCTTCT TTCACCGCTG ATAGCATTGA TTTATTCAAG 
AGCAGTACGC CTTATGCGGG GCGCAGGGAA ATAGGTTATT ATAGTGATTC ACTATTTGGA 
GTTATCGGTG TTGTTGAGAA AAGCGATATG GTTGCGATTT TGCCAGGAAA GATTGCTACT 
TATTTTAGAG ATGTACGGCG TTATAATATA AAAATACTAC GTATGCCTGA TGAAATAATT 
TTTCGTACGT TACCCGTTTA TGCTTATCTG GCTACAAACA GCATCCATTA TAAAAATGCC 
AAAAAACTGA TATCAACATT TCAGTCGACC TTTCTTTTTA GCCAGGAAAA GCAGCCTGAC 
GCTTTGGTTG AAGGAAGCAC ATCCTTATGC GATTTGTCGG TTTAA
 
Protein sequence
MRPIKNAKKI DYNLIKVFDT VITEGNATRA ARKLDVTPAA ISQALLRLQN LYGEELFIRT 
RKGLVPSSKG KSLHQVFRQA IESIENTLCD KTDAQESNEL IVLGSDITEN YYFPALLDMM 
LVNRYIIKHY AIKKTGEYSP ASMLTHGYAD VIMGILDIKS EMIESYLIDN LSDFVCVCGE 
KSPLVGLEKI SLYNFYAARH AVYHSDMFSS FTADSIDLFK SSTPYAGRRE IGYYSDSLFG 
VIGVVEKSDM VAILPGKIAT YFRDVRRYNI KILRMPDEII FRTLPVYAYL ATNSIHYKNA 
KKLISTFQST FLFSQEKQPD ALVEGSTSLC DLSV