Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0024 |
Symbol | |
ID | 6518663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 25116 |
End bp | 25802 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642745200 |
Product | chaperone protein FimC |
Protein accession | YP_002113032 |
Protein GI | 194735713 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.117286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0585411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA ACGTACCGAT TTTCCTTCGA TTATTGCTAC TGCTGTCGGC GGCCGGCCTG TCGTTTGCCG CGCAGGCGGG AGGCATTGCG CTGGGCGCGA CCAGGGTGAT TTATCCGCAG GGAAGTAAGC AAACCTCCTT GCCGATTATT AATTCTTCTG CCAGCAATGT TTTTTTAATT CAGTCATGGG TCGCCAATGC CGATGGTTCA CGCTCGACGG ATTTTATCAT TACGCCGCCT CTCTTTGTGA TCCAGCCTAA AAAAGAAAAT ATATTACGTA TTATGTATGT CGGGCCGTCA TTACCGACCG ATCGCGAAAG CGTATTTTAT TTAAACAGTA AAGCGATACC CTCTGTCGAT AAAAATAAAT TGACCGGCAA CTCCCTGCAA ATTGCGACGC AAAGCGTGAT TAAGCTATTT ATCCGCCCGA AAAATCTGGC GGAGGCGCCA GCTCATGCCC CGTCGACGCT TCGCTGCCGT AACGAGCGCG GCCAGCTAAC GATTACTAAC CCTTCGCCGT ACTACGTTTC GATGGTTGAA CTGTACAGCG CGGGGAAAAA ACTGCCGAAT ACTATGGTAC CGCCGAAAGG CGCGATCACT CTCCCGGCGA CGCCCGGCCA GGTATCTTTG CGCACGGTAA ACGATTTTGG CGCAACGACG CCAGCACGCG TTTGTCCAGC TTCATGA
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Protein sequence | MKKNVPIFLR LLLLLSAAGL SFAAQAGGIA LGATRVIYPQ GSKQTSLPII NSSASNVFLI QSWVANADGS RSTDFIITPP LFVIQPKKEN ILRIMYVGPS LPTDRESVFY LNSKAIPSVD KNKLTGNSLQ IATQSVIKLF IRPKNLAEAP AHAPSTLRCR NERGQLTITN PSPYYVSMVE LYSAGKKLPN TMVPPKGAIT LPATPGQVSL RTVNDFGATT PARVCPAS
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