Gene SeSA_A0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0021 
Symbol 
ID6519057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp20061 
End bp23057 
Gene Length2997 bp 
Protein Length998 aa 
Translation table11 
GC content55% 
IMG OID642745197 
Productputative hydroxymethyltransferase 
Protein accessionYP_002113029 
Protein GI194738313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.10911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTT CCATCCATGC CAGCGCATTT GACGTCAACA GCTGGTATCA AAAAATCACC 
TTAACCTTTA TTAATGAGAG CGGTAATGCG GTCGATATGA ACCATGCCGC AATATCGTTC
ACGGCCTCCG GGCACATCGA TCCATGGGGA AATAGCGGCG GTACGCTCAA AGGGAACCTG
CCGCTTACGT TGAACGATAG TTCGTATGGC ACGCTGGAAA CTAACAACAT CATCATTAAT
AACAGCGATG CATTACTTCT TCAGCCGGGC GAACGCGGGA CGCTCTCTTT CAGCCTCGCG
GCGACACAGG TGCCGGTAAA AATGTCCACC ATCACCTTGA TGCTGGCGTC ATCGTCATCC
GAAGACACAG AGTCTGAAAC CTTATCCGAT GAGGAGACGC CAGCGATACC CGCCGCAGAT
GAACACCCCG CCGAACCCGA TGCGCCGGAA AAGGATAACG ACCTTCAGGA ACGCGGCCTT
ACGCTTAACG TTAGCGAGTT GAATACCGCG AGTTGGTATC AACGCGTCAC CTTTACGCTG
ACCAACCTCT ACGCCCAGGC GGTAGATCTC AATCAGCTTC AACTGAATTT TACGGCCAGC
GCGCACCCCG ACCCCTACAG TCCGTTTCAG GGAACAATGC TGGGGAATCA GGCCGTGACG
CTGGCCAGCG ATGGGGGATG GCCCATCGAG AAGAATACCA TCACCATTAA TCATGACGGC
GCGCTGATGC TGGCGGCGGG GGATACCGCC GAATTACAGT GCTATCTGGC CGCCACGCAG
ACGCCAGTTG CCATCAGCGA TTTGAGCGCG ACGTTGGCCC ATGACCCTGC CCGTCAGGGA
AAAATTTGCG TTCATTTTCC TGCCATGACG CAGACCGTGG CGCTTAAACC GGCGATTGAG
CTGCTGTTTC CTGCCGGCGA AACCCGTCGC TTTGTCGGTG AGTGGGGAGA GGTGCTGACA
ATAGGCGATC TTAGCGCAGG AACGTATCGG CTTACCGTAC CGGTACTGGC GAATGATGAG
ATGCAAATCG CGCCAGTCGA GTCCTCTTTT ACCGTTACGC TGCAAACCGG CGATGCCGCC
GCGCAGGTCC AGGTATCCTG TCTGCCGATT GTCCGTTATG CCAGCGCGCG TCTGATGATT
GACGCCCCTG CGCTTGGTAA TGCGAAATTG ACCGTTGAGA TCGCCGATGC TACGCAAGCG
GATGAGCGTA CCGTCACGCT TATCGCCAAC CAACCGCAGT TAATCACCCG GCTACTGGCG
GGGCATCATT ATACGGTCAA TCTGCAGCCT GCGATGATTA ATAACCGCTT TATATCGGCA
CCCATACAGC TTACGGGTTT TATCCCTGCT GCGGCGCAGG TTGCCGAGGT TGCTGTCGCT
TACCAGCAGG CAGCGATCGA CACGGCGAGT TTCGTGACGG TGGATGCCAC TCTACTGGGC
CTGCCTGATG GCGTCGCGCC GCAGCGTTAT CTGTTCAGCA GCGGTAAATA TCAATACTCA
TTAATGCTGG AGAGCGGTAG CGATCGGCAG ACGTTGGCAT TACGCTTTGC GCCCGGGCTG
TATGATGTTC AGACGGACGA TATTTTCATC GACAGCGTGC CGTGGCGTTG TGAACAGGCC
GGGCCGCTAC GGTTGTTGCA AAAGGTCAAC CATGTGGCGC TGGAGTTTCT GCCCGGCGTG
ACGCTACAGG TAAAAGGTTG GCCTGATTAC CTTGCTCATG GCGGCGTGAC GGTTAACGCG
CCAGAGACGG TTTCTCTTTA TCGCGATATA CCGTTTAGCG CGTTGTTTAA ATACGATGGT
TTTGACGGCG GCGGCGATCC GGTTCCGGCC GCGGAGGTTG ACGTGAACGG GGATGGTTTT
CTGGATTACG CGACGTTACC GATCCATAAA ACCGTTGCGC TGGTGCGCCA GATAGAAAAA
GAAGCCGGGC GTAGCGTCAT GCCGGTAATG GTTATTTATA CCGCGAATGC CAGCGGCGGT
AGCGCCCTGG CGGATTTACA GGATGCGCAA AAGCTACGTA ACCATTTTGG TAACTTTATT
ACCCAGTGTC TGGCGGCGCA GTCATACAAA GATGAGACGC ATCCTGTCCC GGCCACCTTT
GTGCTTAACC CGGATTTTCT CGGGGCGCTA CAGCAAGGAC CGTATGGCTA TACCGTAGTA
CGGCAAAAAA ACAGTGTGCC GGTGAATGCC CAACTGGCGA CGGCGATACA AGCATTACCG
GCGATGGCTG GCTTTATCGC GCCTTCGTTG CCGACGTTTA GCGACGATCT CTACGGCTAT
ATTCAGGCGG TGAACTATCT TGTTCGTCAG TTTGCCCCGG ACGTGGCTTT TGGCTGGCAG
ACGAATGTCT GGGCGACAGG AACGGCGGAC TGGGTGCTGC GCGATACCGC TGATCCGGTA
GCTGAAGGGC AGGCGATCGC CGAATTTATT CATGAACTGG GCGTTTATAG CGGAGAATAT
GCGCCGGACT TTATTGCGTT TGATAAATTT GAGCGTGACT GTTTCAGTCC TGATGCGCTT
GCCCACTATG GCTGGAATGC GACATGCTGG CTTAATTACC TGGCGATGGT CAAACAGGTG
ACGAAAGCGC TGCTGACGCC CGCCATGCTG TGGCAAATCC CTGGCGGCCA TATGCCTACA
GTAGAAGAGG GCGTCAGTAA AATCAGCGCT GCGCACTTTG CATCCGGCGG AACCTTTTTT
ATGGGGGACG CCCGCATTGG CAGCGATCCT GACACGCTCT CTTTGCAGCT ACTCAATACG
GCCTTAAATA GCGCGACTTA CGGCGTCCCG ACCGTCGGCG ACTTTTTACG TAAAGATAAA
GGGTATGACT GGGGCCAGAT GCAGGCGCTG AACCTACCGG ACTTTAACGT CTTTTCGATC
TTATGGGGCG GTGGTTCTAC TATCAGTATT ACGACAATCC ATTCTAACGG TGAAGACGGC
GGCTGGCTGG CGGATAAAAT GGTAGAGTAT TATGCTGCTC CACGCTATTT CAGATAA
 
Protein sequence
MTISIHASAF DVNSWYQKIT LTFINESGNA VDMNHAAISF TASGHIDPWG NSGGTLKGNL 
PLTLNDSSYG TLETNNIIIN NSDALLLQPG ERGTLSFSLA ATQVPVKMST ITLMLASSSS
EDTESETLSD EETPAIPAAD EHPAEPDAPE KDNDLQERGL TLNVSELNTA SWYQRVTFTL
TNLYAQAVDL NQLQLNFTAS AHPDPYSPFQ GTMLGNQAVT LASDGGWPIE KNTITINHDG
ALMLAAGDTA ELQCYLAATQ TPVAISDLSA TLAHDPARQG KICVHFPAMT QTVALKPAIE
LLFPAGETRR FVGEWGEVLT IGDLSAGTYR LTVPVLANDE MQIAPVESSF TVTLQTGDAA
AQVQVSCLPI VRYASARLMI DAPALGNAKL TVEIADATQA DERTVTLIAN QPQLITRLLA
GHHYTVNLQP AMINNRFISA PIQLTGFIPA AAQVAEVAVA YQQAAIDTAS FVTVDATLLG
LPDGVAPQRY LFSSGKYQYS LMLESGSDRQ TLALRFAPGL YDVQTDDIFI DSVPWRCEQA
GPLRLLQKVN HVALEFLPGV TLQVKGWPDY LAHGGVTVNA PETVSLYRDI PFSALFKYDG
FDGGGDPVPA AEVDVNGDGF LDYATLPIHK TVALVRQIEK EAGRSVMPVM VIYTANASGG
SALADLQDAQ KLRNHFGNFI TQCLAAQSYK DETHPVPATF VLNPDFLGAL QQGPYGYTVV
RQKNSVPVNA QLATAIQALP AMAGFIAPSL PTFSDDLYGY IQAVNYLVRQ FAPDVAFGWQ
TNVWATGTAD WVLRDTADPV AEGQAIAEFI HELGVYSGEY APDFIAFDKF ERDCFSPDAL
AHYGWNATCW LNYLAMVKQV TKALLTPAML WQIPGGHMPT VEEGVSKISA AHFASGGTFF
MGDARIGSDP DTLSLQLLNT ALNSATYGVP TVGDFLRKDK GYDWGQMQAL NLPDFNVFSI
LWGGGSTISI TTIHSNGEDG GWLADKMVEY YAAPRYFR