Gene SeSA_A0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0003 
SymbolthrB 
ID6519243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2801 
End bp3730 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content58% 
IMG OID642745179 
Producthomoserine kinase 
Protein accessionYP_002113011 
Protein GI194734054 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.45853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAAG TGTATGCCCC GGCTTCCAGC GCGAACATGA GCGTCGGTTT CGACGTGTTG 
GGCGCGGCCG TCACACCCGT TGACGGCACG TTGCTGGGCG ATGTGGTATC CGTTGAAGCA 
GCGGACCATT TCCGTCTGCA TAACCTGGGG CGATTTGCCG ATAAACTGCC GCCGGAGCCG 
CGTGAAAATA TTGTTTATCA GTGCTGGGAA CGTTTTTGCC AGGCATTGGG GAAAACCATC 
CCGGTGGCGA TGACGCTGGA AAAAAATATG CCGATTGGTT CCGGGTTAGG GTCCAGCGCC 
TGTTCCGTCG TTGCTGCGCT GGTCGCGATG AATGAGCACT GCGGCAAACC GTTAAACGAC 
ACGCGTCTGT TGGCGCTGAT GGGCGAGCTG GAAGGCCGTA TCTCCGGCAG CATCCATTAC 
GATAACGTCG CGCCGTGCTT TCTTGGCGGT ATGCAGCTGA TGATTGAAGA AAACGGCATT 
ATTAGTCAGC AGGTGCCGGG CTTTGATGAG TGGCTATGGG TACTGGCTTA TCCGGGCATT 
AAAGTTTCCA CCGCAGAAGC ACGGGCCATT TTGCCTGCGC AGTATCGCCG TCAGGATTGC 
ATTGCGCATG GACGGCATCT GGCCGGTTTT ATTCACGCCT GTTACTCGCG GCAGCCGCAG 
CTTGCCGCCG CGCTGATGAA AGATGTTATT GCCGAACCAT ACCGCGCGCG TTTACTGCCG 
GGCTTTAGCC AGGCGCGGCA GGCGGTATCG GAGATCGGCG CGCTGGCGAG CGGGATTTCC 
GGGTCGGGGC CGACGCTGTT TGCGCTATGC GATAAACCGG AGACGGCGCA GCGCGTCGCG 
GACTGGCTGA GCAAACATTA TCTGCAAAAT CAGGAAGGCT TCGTTCATAT TTGCCGGCTG 
GATACGGCGG GCGCACGAGT AGTGGGATAA
 
Protein sequence
MVKVYAPASS ANMSVGFDVL GAAVTPVDGT LLGDVVSVEA ADHFRLHNLG RFADKLPPEP 
RENIVYQCWE RFCQALGKTI PVAMTLEKNM PIGSGLGSSA CSVVAALVAM NEHCGKPLND 
TRLLALMGEL EGRISGSIHY DNVAPCFLGG MQLMIEENGI ISQQVPGFDE WLWVLAYPGI 
KVSTAEARAI LPAQYRRQDC IAHGRHLAGF IHACYSRQPQ LAAALMKDVI AEPYRARLLP 
GFSQARQAVS EIGALASGIS GSGPTLFALC DKPETAQRVA DWLSKHYLQN QEGFVHICRL 
DTAGARVVG