| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_B0108 |
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| Symbol | |
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| ID | 6515122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011092 |
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| Strand | + |
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| Start bp | 89817 |
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| End bp | 92567 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642745152 |
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| Product | TriC protein |
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| Protein accession | YP_002112984 |
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| Protein GI | 194733818 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC TCAACAAGGC GCTGACCCGA CCGGCGGCGC TGTGGGGGGT CCCGCTTGTC
CCCCTGCTGT TCACCCTGTG CATCCTTACC CTGGCGGCCG TCTGGTCACG TTTTTACTGG
CTTCTCCTGC TTCTCATACC TGCCTTTATC GAGCTGAGAC GGCTGGCAAA AGAGGACATT
CATTTCTTTG ACCTGAAGTT GCTGGCGTTT AAAACGCGTG GCAACCGCGC GGCGACCCGG
CATTTCGGGA CAAAGGCGCT TGTCGCAAAC CAGTACGACG CCATAGACGT TACGGAGTTT
ATAAAACATA TGCGGCTCAA CGAGAGTATC CCGCTGTCCC GCTATCTCCC CTGGTCTTCC
CACCTGCACG AGCAGGTGGT GAAGAACAAA AAAGGTGACT TTGTCAGCAC CTGGGAGATC
GGCGGTATCA TTTTTGAATG CGAGGATGAA CATTACCTCG CCACCCTGGA CATGCAGCTC
AACAACGTTA TCCGCTCCTT TGAGGGGCTA CCCGTTACCT TCTATACCCA TCTGGTGAGC
GACGAATTTA CCGACACGCT TGAATGTGAA TCCGGGATTC CGTTTTCAGA TGAAATCGCG
CGTCTGTTTT ACGCCTCCCG CGAGGGCAAA CCTTTCTACC AGCGTCGCCT CTTCTTCACC
GTCTGCTTCA ATCCGCACAC CGGCATTGAG CGGGCGACCA TGAAACAGAA GTCCCTGGGC
GAACGTAAAA CCCTGCTCGA CAATGCCCTG CAGGTGATGC AGGAGCACCG GCAAGCGATT
GGCACGGCGC TGTCACGCTA CGCGGCGCGG CCGCTTGGCA CTTATGAGGA GAACGGGCAC
GTGTTCTCCT CCCAGCTGGC GTTTTACAAC TTTCTGATCA CCGGCAGGTG GCAGAAAGTC
CGCGTCACCC GCACGCCGTT TTATGACGTG CTGGGCGGCA CGGATATTTT CCCTTCCACC
GACATTGGCC AGGTCAGCCA CACCGACGGC CAGAGCTACT TTCGCGGGCT GGAAATCAAG
GATTACAGCA CTGAAACCAT CACCGGGCTG TATGACTCGC TTCTTTATGC CCGCTGCCGG
TACCTGTTCA CGCAGTCCTA TACCTGCATG GGTAAGGATG AAGCGCGGGG CTGCATCCGC
ACCATCGAGA AACGCCTGAA GTCTGCCGAG GATGATGCGA TCTCCCAGCA GGAAGACCTG
AAGGTCGCCC GCGACATGCT TCAGTCCGGC ATTATTTCAT TCGGGAAATA TCACCAGACG
CTTATTGTCA GCGCCCCAAC CAGCGAGCAG GTTATCCGGG ACACCAACAC CCTGGCGGAT
ACCCTGAAGG ATCTCGGTTT CATCATGACC CTGTCCCGCG AGTCGCTGTC GGCGGCGTAT
CTCGCGCAGT TGCCGGGTGT GTATCACCTG CGCCCGCGTC TGGTGCCGGT GAGCAGCCTC
AACTACGCCG AAATGGTGTC GTTTCACAAC TTTCACCCGC ACAAGCGGGA CGGGAATGCC
TGGGGGGAGG CGATTGCCGT TGTTCCGACC CCGTCCGGGG GATGTCAGTA CGTGAATCTG
CACAACAGCC AGGCCGATGT TGACGAGTTC AGCGAGAAGC CGCCGGGTAA CACCATGCTG
CTCGGCAGTA CCGGGACGGG GAAATCGACC CTGCTGATGA TGTTCCAGCA TCTGATGCAG
AAATACCGGC GTCCTGAGTC GTTTGCGCCG GGGGCGACGA AAAAGCGCTT CACCTCGGTG
GTCTTTGATA AAGACCGTTC GGCGGAAATG TCGATACGCC TCCAGGGCGG CTCGTACTTC
CGTTTCCGTT CAGGCGAGAA GACCGGCCTT AACCCGTTTG CGCTCGCTCC AACGAAACGT
AACCGCAACT TCCTCAAGAA GCTGATGCGA ATGATGTGCA CAAGGGACGG CAAACCGCTC
GACCCGCGCG ATGAAGAACG CCTCAGCGAG GCAGTGGACA CCATCATGCT GGACTACCCG
CCTGAGCTTC GTCGCAACGG CATCACCCGC ATGCTGGAAG TGCTGCATGA AGCCCCGACG
AAGGACGCAC GGATGAACGG GCTGCGCATC CGTCTCCAGC AGTGGGCGCA GGGCGGGGAG
TTTGGCTGGG TGTTTGATAA TGACGTGGAC ACCTTTGATA TCGACAATAT TGATAATTTC
GGCATCGACG GCACGGAGTT CCTGAACGAC AAAGACGTGC GCAGCCCGCT CACCTTCTAC
CTGCTCTACC GCGTGACCAG CCTCCTCGAT GGCCGCCGCC TGGTCATTTT CATGGATGAA
TTCTGGAAAT GGCTTCAGGA CCCGGAGTTT TCAAAATTCG CCCTCGACAT GCTGAAGGTC
ATTCGAAAGC TCAACGGCAT TTTCTTCCCG GCCACGCAGT CGCCGGAGGA GATGTGCAAG
CACGAGATCT CGGCGGCCAT TATCGAGCAG TGTAGTACCC GCATCTTCAT GGCGAACCAG
CAGGCGAAGG AGTACGACTA CGTGGACATG CTGCGGGTGC CGAAAGCGGT TTACGACATC
GTGACCACCC TCGACCCCTA CGCCCGCCAG ATGGTGATCA TGAAATCTCC GCTGCGGCGT
GGTGACGTGC GCCCGTATAT CGCACAAATC ACCCTCGACC TCTCCGGGCT AGGTCGCTAC
ACGAAGCTGC TCAGCGCCAG TGCGGACAAC CTGAAAATTT TTGACGAGAT CTGGCAGGAG
GGTATGAAGC CGGAAGACTG GAAAGACGAA ATGCTGAGAC GTGCCGTTTA A
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| Protein sequence | MTILNKALTR PAALWGVPLV PLLFTLCILT LAAVWSRFYW LLLLLIPAFI ELRRLAKEDI
HFFDLKLLAF KTRGNRAATR HFGTKALVAN QYDAIDVTEF IKHMRLNESI PLSRYLPWSS
HLHEQVVKNK KGDFVSTWEI GGIIFECEDE HYLATLDMQL NNVIRSFEGL PVTFYTHLVS
DEFTDTLECE SGIPFSDEIA RLFYASREGK PFYQRRLFFT VCFNPHTGIE RATMKQKSLG
ERKTLLDNAL QVMQEHRQAI GTALSRYAAR PLGTYEENGH VFSSQLAFYN FLITGRWQKV
RVTRTPFYDV LGGTDIFPST DIGQVSHTDG QSYFRGLEIK DYSTETITGL YDSLLYARCR
YLFTQSYTCM GKDEARGCIR TIEKRLKSAE DDAISQQEDL KVARDMLQSG IISFGKYHQT
LIVSAPTSEQ VIRDTNTLAD TLKDLGFIMT LSRESLSAAY LAQLPGVYHL RPRLVPVSSL
NYAEMVSFHN FHPHKRDGNA WGEAIAVVPT PSGGCQYVNL HNSQADVDEF SEKPPGNTML
LGSTGTGKST LLMMFQHLMQ KYRRPESFAP GATKKRFTSV VFDKDRSAEM SIRLQGGSYF
RFRSGEKTGL NPFALAPTKR NRNFLKKLMR MMCTRDGKPL DPRDEERLSE AVDTIMLDYP
PELRRNGITR MLEVLHEAPT KDARMNGLRI RLQQWAQGGE FGWVFDNDVD TFDIDNIDNF
GIDGTEFLND KDVRSPLTFY LLYRVTSLLD GRRLVIFMDE FWKWLQDPEF SKFALDMLKV
IRKLNGIFFP ATQSPEEMCK HEISAAIIEQ CSTRIFMANQ QAKEYDYVDM LRVPKAVYDI
VTTLDPYARQ MVIMKSPLRR GDVRPYIAQI TLDLSGLGRY TKLLSASADN LKIFDEIWQE
GMKPEDWKDE MLRRAV
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