Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_B0100 |
Symbol | |
ID | 6515116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011092 |
Strand | - |
Start bp | 83905 |
End bp | 85623 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642745144 |
Product | histidine kinase |
Protein accession | YP_002112976 |
Protein GI | 194733789 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.102093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.549311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA ATTTCTTTAT CATTTTGGTT GCTCTGCTTT TGTTGATAGC ATTCACTGTG TCTAGTGTTG TTAAGTACAC CAGTCTTTTA TCGGAGAAAA ATTTATACAC CGTCGCTGGC ACCCAAGAAA ACTACGGTTT CTCAGTGGCA AAATTCATTA TACAGTTGAA TGAGCTTTAC ACGCTAATCA ATAGCGATAA TACTATTGAC GATGTTAGGC TTAAATTCGA TATCCTTTAT TCTCGTTTGA ATGTTATTTA TGTAAAGAGT GAGGCGACTG CACCTCTATA TAAACAGCAA GGCTATGAAG AAACAATTGA TTCGATAAAC AAAAAGCTTG AAGACATAGA CGGGCTGCTT TCGCATAATC ACCCTGATTA TAAAAAAATA AGTACAATCA TAGCTGATAT AAAACCGCTA ACTAAAACCG TTACAAATCT TGCTGATATG GCTGAAATAG CACAAAGGAA TGACGCTCTT AAAGATTTCA GGAGCAAACG TCAGCAGTTA TGGACTCTGC TTTTTATTAC AGGTGGGTTG ATTTCCTTAC TTCTTTTTGT CCTATTTATT TACATAAGTA AAATTAACCG ATTGTTACTA TCAGAACGGG CTGCTTTTGC CAGTAAAAAT GCATTTTTAG GTATGGTAGG CCATGAACTC AGAACATCTT TACAGGCAAT AGTGTCTATC ATTGATGTCG TAACCAATAA TCTGAGTGGA GGGATTAAAT CTGGTCAGAT AGAACGACTT GAAACTGCTG TTTCGAAAAT GGAGCGCCAG TTAAATGATT TGGCTGAATT TGCAAAAATT GACAACGGAT CTGTAGAGAT AAAAAACACC TATAATAGCT TGCAAGCAAT TGTTACTAAC GCTGTGCAGG ATTGCATTGC TATTTATGAA AAAAAGGATG TCACAGTTAA AATAAAAAAC AATAATGATG CAGTGATTTT TACAGATGCT CTACGCCTTA ATCAAGTAAT TGAAAACTTA ACCAGTAACG CTATTAAGTA CACTGAGCGC GGGGAAGTTA ATGTAGATTA CTTTATAGAA AAAGGTAAGG TATTAAATAT TGTCATTTCT GATACCGGAA AGGGAATCCC TAAAGACAAA CTAAAGTTCA TATTTAAACC ATTTACACGA GTTGTAGATT CGAAATCCAC TGTACCTGGA TTTGGGATGG GACTTGCTAT TGTTGCAGGG ATAATCAGAC TATTAAAAGG TACTATTCAT ATATCTAGTG AAGTAAATGT AGGTACAACT GTTACAGTGA GAATACCTAT CAAGTTGGGA GATAGCAGCC TTGCAACAGC TGAGGTATCT GCTTCAGCTC CCGGAGATGT CTTCGGCGTT CTTAGCTTGC TTGTTATTGA TGATAATGAA ATGGCCTGTT CGTCTCTTTC CAGTCTGCTT ACTAATGCTG GATACATTGT CGAGGCTACA ACCTCGCCTG AACGAGCCCT GGAAAAGCTT CTGCGTAAAC CTTATGACGT TGTCCTGAGT GATTTACAAA TGCCAGGCAT GACAGGTGAT GAGCTGTATG CAACTGTTAG TAGCAGTCAG AATCCTAATC GATCCACGCC TTTCATATTC ATCAGCGCAT ACAGTGATGC ACACTCTATC GGACAGGCTC CTTTGTTAAC TAAACCTGTC AGGTTAAAAG ATATAAACCT TAAAATACAT GAGGTTATGT CAAATCAAGG ACGAGTCAAA AGTGAGTAG
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Protein sequence | MKKNFFIILV ALLLLIAFTV SSVVKYTSLL SEKNLYTVAG TQENYGFSVA KFIIQLNELY TLINSDNTID DVRLKFDILY SRLNVIYVKS EATAPLYKQQ GYEETIDSIN KKLEDIDGLL SHNHPDYKKI STIIADIKPL TKTVTNLADM AEIAQRNDAL KDFRSKRQQL WTLLFITGGL ISLLLFVLFI YISKINRLLL SERAAFASKN AFLGMVGHEL RTSLQAIVSI IDVVTNNLSG GIKSGQIERL ETAVSKMERQ LNDLAEFAKI DNGSVEIKNT YNSLQAIVTN AVQDCIAIYE KKDVTVKIKN NNDAVIFTDA LRLNQVIENL TSNAIKYTER GEVNVDYFIE KGKVLNIVIS DTGKGIPKDK LKFIFKPFTR VVDSKSTVPG FGMGLAIVAG IIRLLKGTIH ISSEVNVGTT VTVRIPIKLG DSSLATAEVS ASAPGDVFGV LSLLVIDDNE MACSSLSSLL TNAGYIVEAT TSPERALEKL LRKPYDVVLS DLQMPGMTGD ELYATVSSSQ NPNRSTPFIF ISAYSDAHSI GQAPLLTKPV RLKDINLKIH EVMSNQGRVK SE
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