| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_B0100 |
|---|
| Symbol | |
|---|
| ID | 6515116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011092 |
|---|
| Strand | - |
|---|
| Start bp | 83905 |
|---|
| End bp | 85623 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642745144 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002112976 |
|---|
| Protein GI | 194733789 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.102093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.549311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ATTTCTTTAT CATTTTGGTT GCTCTGCTTT TGTTGATAGC ATTCACTGTG
TCTAGTGTTG TTAAGTACAC CAGTCTTTTA TCGGAGAAAA ATTTATACAC CGTCGCTGGC
ACCCAAGAAA ACTACGGTTT CTCAGTGGCA AAATTCATTA TACAGTTGAA TGAGCTTTAC
ACGCTAATCA ATAGCGATAA TACTATTGAC GATGTTAGGC TTAAATTCGA TATCCTTTAT
TCTCGTTTGA ATGTTATTTA TGTAAAGAGT GAGGCGACTG CACCTCTATA TAAACAGCAA
GGCTATGAAG AAACAATTGA TTCGATAAAC AAAAAGCTTG AAGACATAGA CGGGCTGCTT
TCGCATAATC ACCCTGATTA TAAAAAAATA AGTACAATCA TAGCTGATAT AAAACCGCTA
ACTAAAACCG TTACAAATCT TGCTGATATG GCTGAAATAG CACAAAGGAA TGACGCTCTT
AAAGATTTCA GGAGCAAACG TCAGCAGTTA TGGACTCTGC TTTTTATTAC AGGTGGGTTG
ATTTCCTTAC TTCTTTTTGT CCTATTTATT TACATAAGTA AAATTAACCG ATTGTTACTA
TCAGAACGGG CTGCTTTTGC CAGTAAAAAT GCATTTTTAG GTATGGTAGG CCATGAACTC
AGAACATCTT TACAGGCAAT AGTGTCTATC ATTGATGTCG TAACCAATAA TCTGAGTGGA
GGGATTAAAT CTGGTCAGAT AGAACGACTT GAAACTGCTG TTTCGAAAAT GGAGCGCCAG
TTAAATGATT TGGCTGAATT TGCAAAAATT GACAACGGAT CTGTAGAGAT AAAAAACACC
TATAATAGCT TGCAAGCAAT TGTTACTAAC GCTGTGCAGG ATTGCATTGC TATTTATGAA
AAAAAGGATG TCACAGTTAA AATAAAAAAC AATAATGATG CAGTGATTTT TACAGATGCT
CTACGCCTTA ATCAAGTAAT TGAAAACTTA ACCAGTAACG CTATTAAGTA CACTGAGCGC
GGGGAAGTTA ATGTAGATTA CTTTATAGAA AAAGGTAAGG TATTAAATAT TGTCATTTCT
GATACCGGAA AGGGAATCCC TAAAGACAAA CTAAAGTTCA TATTTAAACC ATTTACACGA
GTTGTAGATT CGAAATCCAC TGTACCTGGA TTTGGGATGG GACTTGCTAT TGTTGCAGGG
ATAATCAGAC TATTAAAAGG TACTATTCAT ATATCTAGTG AAGTAAATGT AGGTACAACT
GTTACAGTGA GAATACCTAT CAAGTTGGGA GATAGCAGCC TTGCAACAGC TGAGGTATCT
GCTTCAGCTC CCGGAGATGT CTTCGGCGTT CTTAGCTTGC TTGTTATTGA TGATAATGAA
ATGGCCTGTT CGTCTCTTTC CAGTCTGCTT ACTAATGCTG GATACATTGT CGAGGCTACA
ACCTCGCCTG AACGAGCCCT GGAAAAGCTT CTGCGTAAAC CTTATGACGT TGTCCTGAGT
GATTTACAAA TGCCAGGCAT GACAGGTGAT GAGCTGTATG CAACTGTTAG TAGCAGTCAG
AATCCTAATC GATCCACGCC TTTCATATTC ATCAGCGCAT ACAGTGATGC ACACTCTATC
GGACAGGCTC CTTTGTTAAC TAAACCTGTC AGGTTAAAAG ATATAAACCT TAAAATACAT
GAGGTTATGT CAAATCAAGG ACGAGTCAAA AGTGAGTAG
|
|---|
| Protein sequence | MKKNFFIILV ALLLLIAFTV SSVVKYTSLL SEKNLYTVAG TQENYGFSVA KFIIQLNELY
TLINSDNTID DVRLKFDILY SRLNVIYVKS EATAPLYKQQ GYEETIDSIN KKLEDIDGLL
SHNHPDYKKI STIIADIKPL TKTVTNLADM AEIAQRNDAL KDFRSKRQQL WTLLFITGGL
ISLLLFVLFI YISKINRLLL SERAAFASKN AFLGMVGHEL RTSLQAIVSI IDVVTNNLSG
GIKSGQIERL ETAVSKMERQ LNDLAEFAKI DNGSVEIKNT YNSLQAIVTN AVQDCIAIYE
KKDVTVKIKN NNDAVIFTDA LRLNQVIENL TSNAIKYTER GEVNVDYFIE KGKVLNIVIS
DTGKGIPKDK LKFIFKPFTR VVDSKSTVPG FGMGLAIVAG IIRLLKGTIH ISSEVNVGTT
VTVRIPIKLG DSSLATAEVS ASAPGDVFGV LSLLVIDDNE MACSSLSSLL TNAGYIVEAT
TSPERALEKL LRKPYDVVLS DLQMPGMTGD ELYATVSSSQ NPNRSTPFIF ISAYSDAHSI
GQAPLLTKPV RLKDINLKIH EVMSNQGRVK SE
|
|---|
| |