Gene SeSA_B0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0064 
Symbol 
ID6515166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand
Start bp56689 
End bp57948 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content55% 
IMG OID642745111 
Productchloramphenicol resistance protein 
Protein accessionYP_002112943 
Protein GI194733791 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.629663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCAA AAAACTTTAG TTGGCGGTAC TCCCTTGCCG CCACGGTGTT GTTGTTATCA 
CCGTTCGATT TATTGGCATC ACTCGGCATG GACATGTACT TGCCAGCAGT GCCGTTTATG
CCAAACGCGC TTGGTACGAC AGCGAGCACA ATTCAGCTTA CGCTGACAAC GTACTTGGTC
ATGATTGGTG CCGGTCAGCT CTTGTTTGGA CCGCTATCGG ACCGACTGGG GCGCCGCCCC
GTTCTACTGG GAGGTGGCCT CGCCTACGTT GTGGCGTCAA TGGGCCTCGC TCTTACGTCA
TCGGCTGAAG TCTTTCTGGG GCTTCGGATT CTTCAGGCTT GTGGTGCCTC GGCGTGCCTT
GTTTCCACAT TTGCAACAGT ACGTGACATT TACGCAGGTC GCGAGGAAAG TAATGTCATT
TACGGCATAC TCGGATCCAT GCTGGCCATG GTCCCGGCGG TAGGCCCATT GCTCGGAGCG
CTCGTCGACA TGTGGCTTGG GTGGCGGGCT ATCTTTGCGT TTCTAGGTTT GGGCATGATC
GCTGCATCTG CAGCAGCGTG GCGATTCTGG CCTGAAACCC GGGTGCAACG AGTTGCGGGC
TTGCAATGGT CGCAGCTGCT ACTCCCCGTT AAGTGCCTGA ACTTCTGGTT GTACACGTTG
TGTTACGCCG CTGGAATGGG TAGCTTCTTC GTCTTTTTCT CCATTGCGCC CGGACTAATG
ATGGGCAGGC AAGGTGTGTC TCAGCTTGGC TTCAGCCTGC TGTTCGCCAC AGTGGCAATT
GCCATGGTGT TTACGGCTCG TTTTATGGGG CGTGTGATAC CCAAGTGGGG CAGCCCAAGT
GTCTTGCGAA TGGGAATGGG ATGCCTGATA GCTGGAGCAG TATTGCTTGC CATCACCGAA
ATATGGGCTT TGCAGTCCGT GTTAGGCTTT ATTGCTCCAA TGTGGCTAGT GGGTATTGGT
GTCGCCACAG CGGTATCTGT GGCGCCCAAT GGCGCTCTTC GAGGATTCGA CCATGTTGCT
GGAACGGTCA CGGCAGTCTA CTTCTGCTTG GGCGGTGTAC TGCTAGGAAG CATCGGAACG
TTGATCATTT CGCTGTTGCC GCGCAACACG GCTTGGCCGG TTGTCGTGTA CTGTTTGACC
CTTGCAACAG TCGTGCTCGG TCTGTCTTGT GTTTCCCGAG TGAAGGGCTC TCGCGGCCAG
GGGGAGCATG ATGTGGTCGC GCTACAAAGT GCGGAAAGTA CATCAAATCC CAATCGTTGA
 
Protein sequence
MSSKNFSWRY SLAATVLLLS PFDLLASLGM DMYLPAVPFM PNALGTTAST IQLTLTTYLV 
MIGAGQLLFG PLSDRLGRRP VLLGGGLAYV VASMGLALTS SAEVFLGLRI LQACGASACL
VSTFATVRDI YAGREESNVI YGILGSMLAM VPAVGPLLGA LVDMWLGWRA IFAFLGLGMI
AASAAAWRFW PETRVQRVAG LQWSQLLLPV KCLNFWLYTL CYAAGMGSFF VFFSIAPGLM
MGRQGVSQLG FSLLFATVAI AMVFTARFMG RVIPKWGSPS VLRMGMGCLI AGAVLLAITE
IWALQSVLGF IAPMWLVGIG VATAVSVAPN GALRGFDHVA GTVTAVYFCL GGVLLGSIGT
LIISLLPRNT AWPVVVYCLT LATVVLGLSC VSRVKGSRGQ GEHDVVALQS AESTSNPNR