Gene SeSA_B0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0057 
Symbol 
ID6515119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand+ 
Start bp51717 
End bp52580 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content44% 
IMG OID642745104 
Productshort chain dehydrogenase 
Protein accessionYP_002112936 
Protein GI194733815 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.551816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCTA ATAGCGAAAA TAAAAGAGTA TGGTTTATTA CCGGAGCAAG CAAGGGGCTT 
GGCTATGCTT TTACATGCGC CGCCTTGAAA GCCGGGGATA AAGTTGTTGC AGTTGCAAGG 
ACTATCGATA ATTTGGCGAA GCTAGAAGAA ACATATCAAG AGAGCTTACT GCCATTAAAC 
CTCGATGTTA CAGATAGGGA GGCTGTTTTT TCTACGGTTG AAACAGCAGT TAAACATTTC 
GGTAGGCTTG ATATTGTTGT TAATAATGCG GGTATCATGA CTATGGGTAT GATTGAAGAA 
CTAAACGAAT CCGATGCTCG GAAACTAATG GACACAAACT TTTTTGGAGC TCTTTGGGTT 
TGTCAGGCAG TGATGCCCTA TTTGAGGTCG CAGCGTTCTG GACATATCAT ACAGATTACA 
AGCATTGGCG CTATTATCTC GGGTCCGATG TCTGGTATTT ACAGTGCAAG TAAATTTGCG 
CTGGAAGGAA TGAGTGAAGC CTTAGCAAAA GAAGCGGAAC ATTTCGGAGT GAAACTCACT 
ATGGTGGAAC CAGGAGGATA TTGGACAGAT TTATACACTT CGATGAGTTA CAGCAATCCA 
TTAGATTCAT ACGGTACACT GCGCGATGAG CTGGCGAAAC AGTATTCCGA AGATTCGGTC 
GATAGTGATC CTTCCTTGGC AGCGGAAGCC CTTATGAAAT TAGTAGCCAG CAATAATCCG 
CCTTTGAGGC TTATCCTTGG CAGCATGGTA TACGATTTGG CGATGGATAC CTTAAAAGCA 
CGGATGGCTA CCTGGGAAGA ATGGGAAGCT GTTAGCCGTG CATCAGAAAA GGCTATTCCT 
GCACCGGAGA GATATGGAGT ATAA
 
Protein sequence
MIPNSENKRV WFITGASKGL GYAFTCAALK AGDKVVAVAR TIDNLAKLEE TYQESLLPLN 
LDVTDREAVF STVETAVKHF GRLDIVVNNA GIMTMGMIEE LNESDARKLM DTNFFGALWV 
CQAVMPYLRS QRSGHIIQIT SIGAIISGPM SGIYSASKFA LEGMSEALAK EAEHFGVKLT 
MVEPGGYWTD LYTSMSYSNP LDSYGTLRDE LAKQYSEDSV DSDPSLAAEA LMKLVASNNP 
PLRLILGSMV YDLAMDTLKA RMATWEEWEA VSRASEKAIP APERYGV