Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4964 |
Symbol | rsmC |
ID | 6492539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 4842484 |
End bp | 4843512 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642745007 |
Product | 16S ribosomal RNA m2G1207 methyltransferase |
Protein accession | YP_002048576 |
Protein GI | 194448966 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00179249 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTT TTACCCCGGC AAGTGAAGTC TTGCTGCGCC ACAGTGATGA TTTCGAACAA AGCCGTATTC TTTTTGCCGG AGATTTGCAG GATGACCTGC CCGCGCGCTT TGAATGCGCC GCCAGCCGCG CGCATACGCA ACAGTTTCAC CACTGGCAGG CGTTAAGCCG CCAGATGGGC GAAAACGTCC GTTTTAGCCT GGTCGCGCAA GCCAGCGATG TCGCTGACTG CGATACGCTG ATCTACTACT GGCCGAAAAA TAAACCCGAA GCGCAGTTCC AGTTGATGAA TATTTTGTCG CTGATGCCGG TGGGCGTCGA TGTTTTCGTC GTGGGGGAAA ACCGCAGCGG CGTACGTAGC GCCGAACCGA TGCTGGCGGA CTATGCGCCG CTGAACAAAG TAGATAGCGC GCGACGTTGC GGCCTTTACC ATGGTCGTCT GGAAAAGCAG CCGCAGTTTA GTCTTGAATC CTGGTGGGCC GAGTACAGCA TCGACGGGCT GACCATCAAA ACGTTGCCGG GCGTATTCAG CCGTGACGGA CTGGATGTTG GTAGCCAACT GCTACTGTCT ACGCTGACGC CGCACACCAA AGGTAAAGTG CTAGATGTCG GCTGCGGCGC TGGCGTGCTT TCCGCCGCGC TGGCCAGCCA TTCGCCGAAA GTGCGCCTGA CGCTGTGTGA CGTCAGCGCT CCGGCGGTGG AAGCCAGCCG CGCCACGCTT GCCGCTAATG GTCTTGAAGG CGAGGTATTC GCCAGCAACG TCTTTTCGGA AGTCAAAGGA CGTTTTGACA TGATCATCTC CAACCCGCCG TTCCACGACG GAATGCAAAC CAGCCTCGAT GCGGCGCAAA CGCTCATTCG CGGCGCAGTG CGCCATCTGA ACAGCGGCGG AGAGTTACGC ATCGTGGCGA ACGCCTTTCT GCCCTATCCT AAGATTCTGG ATGAGACTTT TGGCTTCCAT GAAGTCATCG CGCAAACCGG GCGCTTTAAG GTTTATCGTA CCGTAATGAC CCGTCAGGCG AAGAAATAG
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Protein sequence | MSAFTPASEV LLRHSDDFEQ SRILFAGDLQ DDLPARFECA ASRAHTQQFH HWQALSRQMG ENVRFSLVAQ ASDVADCDTL IYYWPKNKPE AQFQLMNILS LMPVGVDVFV VGENRSGVRS AEPMLADYAP LNKVDSARRC GLYHGRLEKQ PQFSLESWWA EYSIDGLTIK TLPGVFSRDG LDVGSQLLLS TLTPHTKGKV LDVGCGAGVL SAALASHSPK VRLTLCDVSA PAVEASRATL AANGLEGEVF ASNVFSEVKG RFDMIISNPP FHDGMQTSLD AAQTLIRGAV RHLNSGGELR IVANAFLPYP KILDETFGFH EVIAQTGRFK VYRTVMTRQA KK
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