Gene SeHA_C4897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4897 
Symbol 
ID6491046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4779323 
End bp4781440 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content48% 
IMG OID642744943 
ProductUvrD/REP helicase 
Protein accessionYP_002048515 
Protein GI194450327 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC CAACGCCAAA GGTGGCACTT TCTGATGGTT TTCTGGGGGC TTTTGCGCGG 
ATTCCTAAAG CGCAGCAAAA AAAGGTCCAG GAATTTATCT CCAAGTTCCG CCAGGATCCG
ACGAGTAATG GGCTGAACTA CGAAAAGATC CACGATGCAC GCAGCAATAA TGTGCATTCC
GTGCGTATTG ACCAAACCTA CCGGGGGATC GTCCTGAAAC CCGAACAGGG GGATCTGTAT
ATGCTGATGT GGGTGGATAA GCACGACGAA GCTTATGACT GGGCGCGGCG ACATGATTGT
GCAATTCACC CGGTTACTGG TGCGATTCAG GTAATTGATA TCAGCTATAT TAAACCCGCC
TCCGAACCTG TTGTTGTTGA TAAACCCAAA CTCTTTGCTG CTTATACTGC GGAGCAGATC
CTCGCGCTCG GTGTTCCTCC TGTGTTTATT GAGCAGGTAA TGGCTCTTGT AGATACAGTG
GGGCTGAATC AGCTAGAAAG CGTGATGCCA GCGGAAGCTT GGGAACCTCT ACACTGGCTG
GCAGAAGGGC TGGATTACCA GGAAGTGCTG GAAGAGTTTA ACGAACATCG TAATGAGCCT
GTTGATACTA ACGACTTTAT TGAGGCGATT GAGCGAAGTA AACGTCGCTT CCATGTTGTT
GAAAATGAAC AGGAGCTACT GCAAATGCTC AATGCGCCAC TGGAAAAATG GCGTGTGTTC
CTGCACCCGA GCCAGCGAAA ACTGGTGGAG TCTCCGGCAA ATGGTCCGGT ACGTGTATTA
GGTGGTGCAG GCACGGGAAA AACAGTTGTT GCGATGCATC GTGCTCGTTG GTTATCCCAA
CGTCTGGCCG ATAAACCGGG TAAGAAAGTC CTGTTCACGA CCTTCACCCG CAACCTGGCG
GCGGATATTC GCGCCAACCT CCAGCGTTTG TGTAGTCGTG AGGAGATGGC GCGTATTGAA
GTTGTTAACA TTGATGCCTG GATGAGCGAG CAACTGAAAC GCCATGGATA TGATTTCCGC
GTGGTGTATG ACAGCGATGA AGGGCGACGT AAATGCTGGA ACTATGCCTT GCAGCAAGTC
CCTGCTGAAC TGGGTTTACC GGAAAACTTT TATTCTGAAG AGTGGCAACG TATTGTTCAG
CCGAATGCTG TTTACAGCCG TGAAGAATAT CTGAAGGTGA GCCGTATTGG TCGTGGCACG
GCGTTATCAC GTATTCAGCG TGCGAAAATC TGGCCTGTTT TCGAAGAGTT CCGGGCACAA
ATGGCGCGTG CCAAACTGCG AGAAATGGGT GATGCCATGC ATGAGGCTAT TATTCTGTTT
AAAGAAAAAC AGGTGCAATT GCCTTATAGC AGTATCGTAG TTGATGAAGC TCAGGATATA
GGTGCACCGG CCTTTACCCT TATTCGTAGC CTAGTCCCGG AGTCTCCTAA CGATCTTTTT
ATTGTGGGTG ATGGACATCA GCGTATTTAC CGCAATAAAG TCGTGCTCGG TCAGTGTGGT
ATTAATGTTC GTGGGCGTCG TAGTAAAAAA CTGAAAATTA ACTACCGGAC TACAGAAGAG
ACGCGACAGT TTGCTGTCGG GTTATTAACC GGCGTTAAGG TTGATAACCT GGATGGTGAA
ACTGATTCCA GCAACGATTA TTTATCATTG CTTCATGGTG AAAAACCCAT GATCACTTAT
GCTTCAGATT TTAAAGAAGA GGCTGCGACG ATTATCAAGC AAATTCAGGC GTTGTTAGCC
AATGATGTTC GTTCCCAAGA TATCTGCATT ACCGCTCGTA CGAAGCATGC TTACGAGCGT
TATGCTTCTG CTCTGAATGA TGCTGGAATC GAGACCTATA ATTTAGGTCA GGATAGTGGT
GATAGTGATC AACGCCCTGG TGTGCGTATG GCAACTATGC ACCGCATTAA AGGGCTAGAG
TTCCAGTATG TGTTCCTTGC GGGTATCAAC GATGGCGTCG TGCCGGAAGC GAAAGCCATA
TCATCTGACG ATCCTGTTGA ACAACGTGAT GCTCTATTTA ATGAACGTGC GCTACTCCAT
GTTGCAGCAA CCCGTGCGGT AAAAGGGTTA TTTGTTTCTT CATATGGCGT ACCGAGTACA
TTACTAACTG TACACTAG
 
Protein sequence
MTIPTPKVAL SDGFLGAFAR IPKAQQKKVQ EFISKFRQDP TSNGLNYEKI HDARSNNVHS 
VRIDQTYRGI VLKPEQGDLY MLMWVDKHDE AYDWARRHDC AIHPVTGAIQ VIDISYIKPA
SEPVVVDKPK LFAAYTAEQI LALGVPPVFI EQVMALVDTV GLNQLESVMP AEAWEPLHWL
AEGLDYQEVL EEFNEHRNEP VDTNDFIEAI ERSKRRFHVV ENEQELLQML NAPLEKWRVF
LHPSQRKLVE SPANGPVRVL GGAGTGKTVV AMHRARWLSQ RLADKPGKKV LFTTFTRNLA
ADIRANLQRL CSREEMARIE VVNIDAWMSE QLKRHGYDFR VVYDSDEGRR KCWNYALQQV
PAELGLPENF YSEEWQRIVQ PNAVYSREEY LKVSRIGRGT ALSRIQRAKI WPVFEEFRAQ
MARAKLREMG DAMHEAIILF KEKQVQLPYS SIVVDEAQDI GAPAFTLIRS LVPESPNDLF
IVGDGHQRIY RNKVVLGQCG INVRGRRSKK LKINYRTTEE TRQFAVGLLT GVKVDNLDGE
TDSSNDYLSL LHGEKPMITY ASDFKEEAAT IIKQIQALLA NDVRSQDICI TARTKHAYER
YASALNDAGI ETYNLGQDSG DSDQRPGVRM ATMHRIKGLE FQYVFLAGIN DGVVPEAKAI
SSDDPVEQRD ALFNERALLH VAATRAVKGL FVSSYGVPST LLTVH