Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4897 |
Symbol | |
ID | 6491046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 4779323 |
End bp | 4781440 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642744943 |
Product | UvrD/REP helicase |
Protein accession | YP_002048515 |
Protein GI | 194450327 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTC CAACGCCAAA GGTGGCACTT TCTGATGGTT TTCTGGGGGC TTTTGCGCGG ATTCCTAAAG CGCAGCAAAA AAAGGTCCAG GAATTTATCT CCAAGTTCCG CCAGGATCCG ACGAGTAATG GGCTGAACTA CGAAAAGATC CACGATGCAC GCAGCAATAA TGTGCATTCC GTGCGTATTG ACCAAACCTA CCGGGGGATC GTCCTGAAAC CCGAACAGGG GGATCTGTAT ATGCTGATGT GGGTGGATAA GCACGACGAA GCTTATGACT GGGCGCGGCG ACATGATTGT GCAATTCACC CGGTTACTGG TGCGATTCAG GTAATTGATA TCAGCTATAT TAAACCCGCC TCCGAACCTG TTGTTGTTGA TAAACCCAAA CTCTTTGCTG CTTATACTGC GGAGCAGATC CTCGCGCTCG GTGTTCCTCC TGTGTTTATT GAGCAGGTAA TGGCTCTTGT AGATACAGTG GGGCTGAATC AGCTAGAAAG CGTGATGCCA GCGGAAGCTT GGGAACCTCT ACACTGGCTG GCAGAAGGGC TGGATTACCA GGAAGTGCTG GAAGAGTTTA ACGAACATCG TAATGAGCCT GTTGATACTA ACGACTTTAT TGAGGCGATT GAGCGAAGTA AACGTCGCTT CCATGTTGTT GAAAATGAAC AGGAGCTACT GCAAATGCTC AATGCGCCAC TGGAAAAATG GCGTGTGTTC CTGCACCCGA GCCAGCGAAA ACTGGTGGAG TCTCCGGCAA ATGGTCCGGT ACGTGTATTA GGTGGTGCAG GCACGGGAAA AACAGTTGTT GCGATGCATC GTGCTCGTTG GTTATCCCAA CGTCTGGCCG ATAAACCGGG TAAGAAAGTC CTGTTCACGA CCTTCACCCG CAACCTGGCG GCGGATATTC GCGCCAACCT CCAGCGTTTG TGTAGTCGTG AGGAGATGGC GCGTATTGAA GTTGTTAACA TTGATGCCTG GATGAGCGAG CAACTGAAAC GCCATGGATA TGATTTCCGC GTGGTGTATG ACAGCGATGA AGGGCGACGT AAATGCTGGA ACTATGCCTT GCAGCAAGTC CCTGCTGAAC TGGGTTTACC GGAAAACTTT TATTCTGAAG AGTGGCAACG TATTGTTCAG CCGAATGCTG TTTACAGCCG TGAAGAATAT CTGAAGGTGA GCCGTATTGG TCGTGGCACG GCGTTATCAC GTATTCAGCG TGCGAAAATC TGGCCTGTTT TCGAAGAGTT CCGGGCACAA ATGGCGCGTG CCAAACTGCG AGAAATGGGT GATGCCATGC ATGAGGCTAT TATTCTGTTT AAAGAAAAAC AGGTGCAATT GCCTTATAGC AGTATCGTAG TTGATGAAGC TCAGGATATA GGTGCACCGG CCTTTACCCT TATTCGTAGC CTAGTCCCGG AGTCTCCTAA CGATCTTTTT ATTGTGGGTG ATGGACATCA GCGTATTTAC CGCAATAAAG TCGTGCTCGG TCAGTGTGGT ATTAATGTTC GTGGGCGTCG TAGTAAAAAA CTGAAAATTA ACTACCGGAC TACAGAAGAG ACGCGACAGT TTGCTGTCGG GTTATTAACC GGCGTTAAGG TTGATAACCT GGATGGTGAA ACTGATTCCA GCAACGATTA TTTATCATTG CTTCATGGTG AAAAACCCAT GATCACTTAT GCTTCAGATT TTAAAGAAGA GGCTGCGACG ATTATCAAGC AAATTCAGGC GTTGTTAGCC AATGATGTTC GTTCCCAAGA TATCTGCATT ACCGCTCGTA CGAAGCATGC TTACGAGCGT TATGCTTCTG CTCTGAATGA TGCTGGAATC GAGACCTATA ATTTAGGTCA GGATAGTGGT GATAGTGATC AACGCCCTGG TGTGCGTATG GCAACTATGC ACCGCATTAA AGGGCTAGAG TTCCAGTATG TGTTCCTTGC GGGTATCAAC GATGGCGTCG TGCCGGAAGC GAAAGCCATA TCATCTGACG ATCCTGTTGA ACAACGTGAT GCTCTATTTA ATGAACGTGC GCTACTCCAT GTTGCAGCAA CCCGTGCGGT AAAAGGGTTA TTTGTTTCTT CATATGGCGT ACCGAGTACA TTACTAACTG TACACTAG
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Protein sequence | MTIPTPKVAL SDGFLGAFAR IPKAQQKKVQ EFISKFRQDP TSNGLNYEKI HDARSNNVHS VRIDQTYRGI VLKPEQGDLY MLMWVDKHDE AYDWARRHDC AIHPVTGAIQ VIDISYIKPA SEPVVVDKPK LFAAYTAEQI LALGVPPVFI EQVMALVDTV GLNQLESVMP AEAWEPLHWL AEGLDYQEVL EEFNEHRNEP VDTNDFIEAI ERSKRRFHVV ENEQELLQML NAPLEKWRVF LHPSQRKLVE SPANGPVRVL GGAGTGKTVV AMHRARWLSQ RLADKPGKKV LFTTFTRNLA ADIRANLQRL CSREEMARIE VVNIDAWMSE QLKRHGYDFR VVYDSDEGRR KCWNYALQQV PAELGLPENF YSEEWQRIVQ PNAVYSREEY LKVSRIGRGT ALSRIQRAKI WPVFEEFRAQ MARAKLREMG DAMHEAIILF KEKQVQLPYS SIVVDEAQDI GAPAFTLIRS LVPESPNDLF IVGDGHQRIY RNKVVLGQCG INVRGRRSKK LKINYRTTEE TRQFAVGLLT GVKVDNLDGE TDSSNDYLSL LHGEKPMITY ASDFKEEAAT IIKQIQALLA NDVRSQDICI TARTKHAYER YASALNDAGI ETYNLGQDSG DSDQRPGVRM ATMHRIKGLE FQYVFLAGIN DGVVPEAKAI SSDDPVEQRD ALFNERALLH VAATRAVKGL FVSSYGVPST LLTVH
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