Gene SeHA_C4650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4650 
Symbol 
ID6489625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4545838 
End bp4547469 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content53% 
IMG OID642744718 
Productsensory histidine kinase DcuS 
Protein accessionYP_002048295 
Protein GI194448588 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACT CCCTGCCATG CCGGGCGTTA CGCAAACGCC CCATGAAACT CGGCACTACC 
GTCATTCTGA TGGTCAGCGC CGTTTTGTTT TCGGTGCTCG TTGTGGTCCA TCTGATCTAT
TTTTCGCAAA TCAGCAGCAT GACGCGCGAC GCGCTGGCAG ATAAAGCGCT GGCGGTGGCT
CGCTCGCTGG CGGACTCTCC GGCAATTCGC GAGGGGCTGA AAAAACCGCC TGCGGAAAGC
GGCATTCAGC CGCTCGCCGA AGCGGTGAGC CAGCATAATG GCTTTTTGTT TATTGTGGTG
ACCAATATGC AGGGCATCCG TTATTCGCAC CCAGAAACGC AGCGAATCGG CCAACCGTTC
AAAGGCGATG ACATTCTGCT CGCGCTGCAG GGAAAGGAAA ACGTTGCCAT TAATCGCGGC
TTTCTTGCCA AAGCGCTGCG CGTTTTCACA CCGGTTTATG ATGAACACCA CCGGCAGATC
GGCGTGGTAG CGATTGGCCT GGAACTCAGT CACGTTACGC AGCAGATCAA CAATAGCCGC
GGCAGTATTA TCTGGTCCAT TCTGTTCGGC GCTCTGGTGG GGTTATTAGG CACGTATGCG
CTGGTCAAGG TGCTGAAACG TATCCTGTTT GGCCTCGAAC CCTATGAGAT CTCAACCCTG
TTTGAACAAC GCCAGGCGAT GCTGCAGTCA ATCAAAGAGG GCGTTATCGC CGTGGATGAT
AGCGGCGAAG TCACGTTGAT TAACCATGCG GCGCAGGCGC TGCTCGATTA TCGAAAAACG
CAGGATGACG CCAGATTATC CACCCTGAGT CATGCCTGGT CGCAGGTGGT GGACATTAGC
GAAGTGTTGC GTGACGGTAC GCCGCGCCGC GATGAAGAGA TCATCGTCAA AGGCCGCCTG
CTGCTGGTGA ATACCGTTCC GGTGCGCAGC AACGGCGAAA TTATCGGCGC GATATCCACC
TTCAGGGATA AAACAGAAGT TCGCCAACTG ATGCAGCGGT TGGACGGGAT GGTGAACTAC
GCGGATGCGC TCCGTGAACG ATCCCACGAA TTCATGAACA AATTACATGT GATTCTGGGA
TTATTGCACC TGAAGAGTTA TAAGCAGCTT GAAGCGTATA TTATCAAGAC GGCCAATAAC
TATCAGGAAG AGATCGGTTT GCTGCTGGGT AAAATAAAGT CGCCGATTAT CGCTGGCTTT
TTGCTCAGTA AGATTACCCG CGCCTCTGAT TTCGGGCACA GCCTGGTGAT AAGCAGCGAC
AGCCAGTTAC CGGATAATAA CAATGAAGAT CAGGTTACGG TGCTGATTAC GGCGCTGGGT
AATTTGATTG AAAACGCTCT GGAAGCGTTG AGCCAGGAAT CCGGCGGCGA AATCAGCGTC
TCGTTACACT ACCGTCATGG CTGGCTGCAT TGCGAAGTGA GCGATGACGG TCCGGGTATC
GAACCTGAGC GCATCGAGGC GATTTTTGAA AAAGGCGTCT CGTCGAAAGG CGCCGAACGC
GGCGTCGGTT TAGCGCTGGT TAAACAGCAG GTTGAAGCGC TTGGCGGCGT AATTTCCGTG
GAGTCCGAGC CTGGGATCTT CACACAATTT TTTGTACAGT TACCCTGGGA TGGAAAAAGG
ACCAGCCTAT GA
 
Protein sequence
MKHSLPCRAL RKRPMKLGTT VILMVSAVLF SVLVVVHLIY FSQISSMTRD ALADKALAVA 
RSLADSPAIR EGLKKPPAES GIQPLAEAVS QHNGFLFIVV TNMQGIRYSH PETQRIGQPF
KGDDILLALQ GKENVAINRG FLAKALRVFT PVYDEHHRQI GVVAIGLELS HVTQQINNSR
GSIIWSILFG ALVGLLGTYA LVKVLKRILF GLEPYEISTL FEQRQAMLQS IKEGVIAVDD
SGEVTLINHA AQALLDYRKT QDDARLSTLS HAWSQVVDIS EVLRDGTPRR DEEIIVKGRL
LLVNTVPVRS NGEIIGAIST FRDKTEVRQL MQRLDGMVNY ADALRERSHE FMNKLHVILG
LLHLKSYKQL EAYIIKTANN YQEEIGLLLG KIKSPIIAGF LLSKITRASD FGHSLVISSD
SQLPDNNNED QVTVLITALG NLIENALEAL SQESGGEISV SLHYRHGWLH CEVSDDGPGI
EPERIEAIFE KGVSSKGAER GVGLALVKQQ VEALGGVISV ESEPGIFTQF FVQLPWDGKR
TSL