Gene SeHA_C4649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4649 
Symbol 
ID6490500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4545122 
End bp4545841 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID642744717 
ProductDNA-binding transcriptional activator DcuR 
Protein accessionYP_002048294 
Protein GI194448330 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATG TATTAATTGT CGATGACGAT GCGATGGTCG CGGAGTTAAA TCGCCGCTAT 
GTCGCGCAAA TCTCCGGTTT TCATTGTTGT GGAACCGCTT CGACGCTGGA AAAAGCGAAA
GAGTTTATCT TCAACAGTGA AAATCACATT GACCTAATCC TGCTGGATAT CTACATGCAG
CAGGAAAACG GATTGGATCT GCTGCCTGTC CTGCACAGCG CAGGCTGCAA AAGCGACGTT
ATTGTCATTT CTTCTGCCGC TGACGCCGCC ACCATTAAAG ATTCGCTTCA CTACGGCGTG
GTGGATTATC TGATCAAGCC TTTTCAGGCC ACGCGCTTTG AAGAAGCGCT GACCGGCTGG
CTACGTAAGA AAACGGCGAT GGAAAAACGC CAGTATTACG AACAGTCTGA GCTTGACCTG
CTCATTCACG GTAATTCATC CAGCGAGCAG GAGCCTCGTC GGCTACCAAA AGGGCTGACG
CAGCAAACGC TACGCACCTT ATGCCAGTGG ATTGATGCGC ATCAGGAGCA GGAATTTTCT
ACCGACGAGT TGGCCAACGA AGTGAATATC TCGCGCGTCT CCTGCCGTAA ATATCTCATC
TGGCTGGTGA ATTGCCATAT CTTGTTTACC AGTATTCATT ACGGCGTGAC CGGCAGGCCG
GTTTACCGCT ACCGCGTTCA GCCGGAACAT TACTCTTTAC TGAAACAATA TTGTCAGTAA
 
Protein sequence
MINVLIVDDD AMVAELNRRY VAQISGFHCC GTASTLEKAK EFIFNSENHI DLILLDIYMQ 
QENGLDLLPV LHSAGCKSDV IVISSAADAA TIKDSLHYGV VDYLIKPFQA TRFEEALTGW
LRKKTAMEKR QYYEQSELDL LIHGNSSSEQ EPRRLPKGLT QQTLRTLCQW IDAHQEQEFS
TDELANEVNI SRVSCRKYLI WLVNCHILFT SIHYGVTGRP VYRYRVQPEH YSLLKQYCQ