| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4622 |
|---|
| Symbol | nrfC |
|---|
| ID | 6489327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 4514165 |
|---|
| End bp | 4514836 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642744692 |
|---|
| Product | cytochrome c nitrite reductase Fe-S protein |
|---|
| Protein accession | YP_002048269 |
|---|
| Protein GI | 194450668 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03149] cytochrome c nitrite reductase, Fe-S protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.998895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 0.423625 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTGCA CCCGACGTCA ATTTATTACC CGCGTCGGCG CGCTGGCGGC GATCAGTGGG
ATGGCAGGAC GCGTTGTAGC GAACACGTTG AATATTAATG GCGTGCGTTA TGGCATGGTA
CACGATGAGT CATTATGCAT CGGCTGCACG GCCTGCATGG ATGCCTGTCG GGAAGTCAAC
AACGTGCCGG AAGGCGTATC GCGCCTGACG ATTATTCGCA GCGAGCCGCA GGGGACGTTT
CCTGATGTGA AATATCGCTT CTTCCGCCAC TCGTGCCAGC ATTGCGACCA TGCCCCCTGC
GTTGACGTCT GCCCGACCGG CGCATCATTC CGCGATGCCG CCAGCGGTAT TGTCGACGTG
AACCCGGACC TTTGCGTCGG CTGCCAGTAC TGCATTGCCG CGTGTCCCTA CCGCGTGCGC
TTTATCCATC CGGTGAGCAA AACGGCGGAT AAGTGCGATT TCTGCCGGAG AACCAACCTG
AAAGCGGGCA AACAGCCCGC CTGCGTTGAG TCATGCCCGA CGAAGGCGCT GACGTTTGGT
AATCTGGACG ATCCCAACAG CGATATCTCC CGTTTGTTGC GGCAGAAAAC CACCTACCGC
TACAAGCTGG CGCTGGGCAC AAAACCGAAG GTCTACCGCG TTCCCTTTAA CTATGGGGAG
GTGAGCCAAT GA
|
|---|
| Protein sequence | MSCTRRQFIT RVGALAAISG MAGRVVANTL NINGVRYGMV HDESLCIGCT ACMDACREVN
NVPEGVSRLT IIRSEPQGTF PDVKYRFFRH SCQHCDHAPC VDVCPTGASF RDAASGIVDV
NPDLCVGCQY CIAACPYRVR FIHPVSKTAD KCDFCRRTNL KAGKQPACVE SCPTKALTFG
NLDDPNSDIS RLLRQKTTYR YKLALGTKPK VYRVPFNYGE VSQ
|
|---|
| |