Gene SeHA_C4617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4617 
SymbolactP 
ID6492359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4507464 
End bp4509113 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content56% 
IMG OID642744687 
Productacetate permease 
Protein accessionYP_002048264 
Protein GI194450229 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.825598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.309264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAG TTCTGACGGC GCTTGCCGCC GCACTCCCCT TCGCCGCTCA TGCGGCGGAT 
GCCATTAGCG GCGCGGTTGA ACGCCAGCCC ACCAACTGGC AGGCGATTAT CATGTTTTTG
ATTTTCGTCG TGTTTACGCT CGGTATTACC TACTGGGCCT CTAAACGCGT ACGTTCCCGT
AGCGACTACT ACACCGCAGG CGGCAATATC ACCGGGTTCC AGAACGGCCT GGCGATTGCC
GGCGACTATA TGTCCGCCGC GTCATTTCTC GGCATTTCCG CGCTGGTGTT TACCTCCGGT
TATGACGGTC TGATCTATTC GCTGGGCTTC CTTGTCGGCT GGCCAATCAT CCTGTTTTTG
ATTGCCGAGC GCCTGCGTAA TCTGGGACGT TATACTTTTG CTGACGTTGC CTCTTATCGC
CTGAAACAGG GGCCAATCCG TATTCTTTCG GCCTGTGGCT CCCTGGTAGT GGTGGCGCTT
TATCTCATCG CCCAAATGGT CGGCGCCGGT AAACTGATTG AACTGCTGTT CGGCCTCAAC
TATCACATCG CCGTGGTGCT GGTCGGCGTG CTGATGATGA TGTATGTGCT GTTCGGCGGG
ATGCTGGCGA CAACGTGGGT GCAAATTATC AAAGCCGTCC TGTTGCTGTT TGGCGCCAGT
TTTATGGCCT TTATGGTGAT GAAACACGTC GGCTTTAGCT TCAATAATCT GTTTACCGAA
GCCATGGCGG TACACCCGAA AGGCACGGCG ATTATGAGCC CAGGAGGATT GGTGCAAGAT
CCGATTTCGG CATTGTCGTT GGGTCTGGGA CTGATGTTCG GCACCGCCGG CTTGCCGCAT
ATTCTGATGC GTTTCTTTAC GGTCAGCGAT GCCCGCGAAG CGCGCAAGAG CGTGTTCTAT
GCCACCGGTT TTATGGGCTA TTTCTACATT CTGACCTTTA TTATCGGCTT CGGCGCTATC
ATGCTGGTGG GGGCAAATCC CGCCTATAAA GATGCCGCAG GCGCGCTGAT TGGCGGCAAT
AACATGGCGG CGGTGCATCT GGCCAACGCG GTAGGCGGCA ACCTGTTCCT CGGCTTTATT
TCGGCAGTGG CGTTTGCCAC CATTCTGGCG GTGGTCGCAG GTCTGACGCT GGCGGGCGCA
TCGGCGGTGT CGCATGATTT GTACGCCAAC GTGTTCCGCA AAGGCGCAAC CGAACGTGAA
GAGCTGAAGG TGTCGAAAAT CACCGTCCTG GTGCTGGGCG TGATCGCCAT TATCCTCGGC
GTCCTGTTTG AAAATCAGAA CATCGCCTTT ATGGTGGGCC TGGCATTTGC TATCGCCGCG
AGCTGCAACT TCCCCATCAT TCTGCTTTCC ATGTACTGGT CAAAACTGAC CACGCGCGGC
GCTATGCTGG GCGGCTGGTT AGGTTTACTG ACAGCGGTGG TGCTGATGAT TCTTGGCCCT
ACCATTTGGG TGCAGATCCT CGGCCACGAA AAAGCGATCT TCCCGTATGA GTATCCGGCG
CTGTTCTCTA TCAGCGTGGC GTTCCTGGGG ATCTGGTTCT TCTCGGCCAC CGATAACTCG
GCAGAAGGCA ACCGTGAACG TGAGCAGTTC CGCGCTCAGT TTATCCGCTC CCAAACGGGA
TTCGGCGTAC AACAAGGGCG TGCGCATTAA
 
Protein sequence
MKRVLTALAA ALPFAAHAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR 
SDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL
IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN
YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFTE
AMAVHPKGTA IMSPGGLVQD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY
ATGFMGYFYI LTFIIGFGAI MLVGANPAYK DAAGALIGGN NMAAVHLANA VGGNLFLGFI
SAVAFATILA VVAGLTLAGA SAVSHDLYAN VFRKGATERE ELKVSKITVL VLGVIAIILG
VLFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG AMLGGWLGLL TAVVLMILGP
TIWVQILGHE KAIFPYEYPA LFSISVAFLG IWFFSATDNS AEGNREREQF RAQFIRSQTG
FGVQQGRAH