Gene SeHA_C4616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4616 
Symbol 
ID6489914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4506736 
End bp4507425 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content59% 
IMG OID642744686 
ProductLrgB family protein 
Protein accessionYP_002048263 
Protein GI194451753 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.221956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAACG TTCAGTTAAG CGTACTGTGC CTGGTGATTA CGCTGGGAAT TTACTTCGCC 
AATAAGCGTC TGTATCGCCG TTTTCGCAAA CTGCCGTTGA TGCCATTAGT GTTGACGCCG
GCACTGCTGG TGTTAATGCT GGTGTTCGGT CATATCTCCT GGCAAAACTA TATTGGTGAA
TCGCACTGGC TATTGTGGCT GCTCGGCCCG GCGACCATTG CCTTTGCGGT GCCGGTGTAC
GATAACCTCG CGATTATCAA ACGTCACTGG ATGTCGCTCA CCGCGGGCGT AGTGACGGCG
ACGGTGGTGG CGGTCACCAG TTCCGTTTGG CTGGCGCGTC TGTTCACGTT ATCGGATGAG
ATTCAGCGTA GTCTGGCGGT ACGTTCCGTT ACCACGCCAT TTGCGCTGGC GGCGGCAGAA
CCCCTGGGCG GGCAGCCGGA TCTGGTGGCG CTGTTCGTAG TCGTCACTGG CGTGTTTGGC
ATGGCGGTCG GCGACGCGCT ATTTTTGCGT CTCTCTATCC GGGAAGGCAT GGCAAAAGGG
GCAGGATTCG GCGCGGCGTC ACATGGGGCG GGCACAGCGC GTTCCTATGA ACTTGGTCAG
CAGGAGGGCG TCGTCGCCAG TCTGGTCATG ATGCTGTCCG GCGTGGTGAT GGTGCTGGCA
GCCCCGCTGG TGGCGAGGGT GATGTTCTGA
 
Protein sequence
MNNVQLSVLC LVITLGIYFA NKRLYRRFRK LPLMPLVLTP ALLVLMLVFG HISWQNYIGE 
SHWLLWLLGP ATIAFAVPVY DNLAIIKRHW MSLTAGVVTA TVVAVTSSVW LARLFTLSDE
IQRSLAVRSV TTPFALAAAE PLGGQPDLVA LFVVVTGVFG MAVGDALFLR LSIREGMAKG
AGFGAASHGA GTARSYELGQ QEGVVASLVM MLSGVVMVLA APLVARVMF