Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4616 |
Symbol | |
ID | 6489914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 4506736 |
End bp | 4507425 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642744686 |
Product | LrgB family protein |
Protein accession | YP_002048263 |
Protein GI | 194451753 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.221956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAACG TTCAGTTAAG CGTACTGTGC CTGGTGATTA CGCTGGGAAT TTACTTCGCC AATAAGCGTC TGTATCGCCG TTTTCGCAAA CTGCCGTTGA TGCCATTAGT GTTGACGCCG GCACTGCTGG TGTTAATGCT GGTGTTCGGT CATATCTCCT GGCAAAACTA TATTGGTGAA TCGCACTGGC TATTGTGGCT GCTCGGCCCG GCGACCATTG CCTTTGCGGT GCCGGTGTAC GATAACCTCG CGATTATCAA ACGTCACTGG ATGTCGCTCA CCGCGGGCGT AGTGACGGCG ACGGTGGTGG CGGTCACCAG TTCCGTTTGG CTGGCGCGTC TGTTCACGTT ATCGGATGAG ATTCAGCGTA GTCTGGCGGT ACGTTCCGTT ACCACGCCAT TTGCGCTGGC GGCGGCAGAA CCCCTGGGCG GGCAGCCGGA TCTGGTGGCG CTGTTCGTAG TCGTCACTGG CGTGTTTGGC ATGGCGGTCG GCGACGCGCT ATTTTTGCGT CTCTCTATCC GGGAAGGCAT GGCAAAAGGG GCAGGATTCG GCGCGGCGTC ACATGGGGCG GGCACAGCGC GTTCCTATGA ACTTGGTCAG CAGGAGGGCG TCGTCGCCAG TCTGGTCATG ATGCTGTCCG GCGTGGTGAT GGTGCTGGCA GCCCCGCTGG TGGCGAGGGT GATGTTCTGA
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Protein sequence | MNNVQLSVLC LVITLGIYFA NKRLYRRFRK LPLMPLVLTP ALLVLMLVFG HISWQNYIGE SHWLLWLLGP ATIAFAVPVY DNLAIIKRHW MSLTAGVVTA TVVAVTSSVW LARLFTLSDE IQRSLAVRSV TTPFALAAAE PLGGQPDLVA LFVVVTGVFG MAVGDALFLR LSIREGMAKG AGFGAASHGA GTARSYELGQ QEGVVASLVM MLSGVVMVLA APLVARVMF
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