Gene SeHA_C4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4517 
SymbolaceA 
ID6488000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4399056 
End bp4400360 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content56% 
IMG OID642744590 
Productisocitrate lyase 
Protein accessionYP_002048167 
Protein GI194448662 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.924094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.169882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC GTACTCAACA AATCGAAGAA TTACAGAAAG AGTGGACACA ACCGCGCTGG 
GAAGGCATCA CCCGCCCGTA CAGCGCGGAG GAGGTGGTGA AATTACGCGG CTCGGTTAAC
CCGGAATGCA CGCTGGCGCA GCTCGGCGCC GCGAAAATGT GGCGGCTGTT GCACGGTGAA
GCGAAAAAAG GCTATATCAA CAGCCTTGGC GCGCTGACCG GCGGTCAGGC GTTGCAGCAG
GCGAAAGCTG GTATTGAGGC GATTTATCTT TCAGGCTGGC AGGTGGCGGC AGATGCCAAC
CTGGCATCCA GCATGTATCC GGATCAATCG TTGTACCCGG CAAACTCTGT TCCGGCGGTA
GTGGATCGGA TCAACAACAC TTTTCGTCGT GCAGATCAGA TCCAGTGGGC ATCCGGTATT
GAACCCAACG ATCCGCGCTA TGTGGATTAC TTCCTGCCGA TCGTTGCTGA TGCGGAAGCT
GGTTTTGGCG GCGTTCTGAA TGCCTTCGAA CTGATGAAAT CGATGATTGA AGCCGGTGCA
GCGGCCGTTC ACTTCGAAGA TCAGCTGGCG TCGGTGAAGA AATGCGGCCA TATGGGCGGC
AAGGTGCTGG TCCCCACGCA GGAGGCGATT CAGAAACTGG TTGCTGCGCG TCTGGCCGCT
GATGTGATGG GCGTCCCGAC GCTGGTGATT GCGCGTACCG ATGCGGATGC GGCAGATCTG
ATCACCTCCG ACTGCGATCC CTATGACAGC GGTTTTATTA CCGGCGAACG CACCAGCGAA
GGTTTTTACC GCACCCATGC GGGCATTGAG CAGGCGATCA GCCGCGGTCT GGCGTATGCC
CCGTATGCCG ATCTGGTATG GTGCGAAACT TCTACGCCGG ATCTCGAACT GGCGCGTCGT
TTTGCCGATG CTATCCACGC GAAGTATCCG GGCAAACTGC TGGCCTATAA CTGTTCGCCA
TCCTTCAACT GGCAGAAGAA TCTGGACGAC AAGACCATTG CCAGCTTCCA GCAGCAGTTG
TCGGACATGG GTTACAAATA CCAGTTTATT ACCCTGGCGG GCATCCACAG CATGTGGTTC
AACATGTTCG ACCTGGCGCA TGCATACGCT CAGGGTGAGG GTATGAAACA CTATGTTGAG
AAGGTTCAAC AACCCGAGTT CGCCGCGGCG AAAGACGGCT ACACCTTTGT TTCCCACCAG
CAGGAAGTGG GCACTGGTTA CTTCGACAAA GTCACCACCA TTATTCAGGG CGGCGCGTCA
TCCGTTACCG CGTTAACGGG TTCCACCGAA GAATCGCAGT TTTGA
 
Protein sequence
MKTRTQQIEE LQKEWTQPRW EGITRPYSAE EVVKLRGSVN PECTLAQLGA AKMWRLLHGE 
AKKGYINSLG ALTGGQALQQ AKAGIEAIYL SGWQVAADAN LASSMYPDQS LYPANSVPAV
VDRINNTFRR ADQIQWASGI EPNDPRYVDY FLPIVADAEA GFGGVLNAFE LMKSMIEAGA
AAVHFEDQLA SVKKCGHMGG KVLVPTQEAI QKLVAARLAA DVMGVPTLVI ARTDADAADL
ITSDCDPYDS GFITGERTSE GFYRTHAGIE QAISRGLAYA PYADLVWCET STPDLELARR
FADAIHAKYP GKLLAYNCSP SFNWQKNLDD KTIASFQQQL SDMGYKYQFI TLAGIHSMWF
NMFDLAHAYA QGEGMKHYVE KVQQPEFAAA KDGYTFVSHQ QEVGTGYFDK VTTIIQGGAS
SVTALTGSTE ESQF