Gene SeHA_C4489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4489 
SymbolthiH 
ID6489006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4372422 
End bp4373555 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content55% 
IMG OID642744564 
Productthiamine biosynthesis protein ThiH 
Protein accessionYP_002048144 
Protein GI194449350 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR02351] thiazole biosynthesis protein ThiH 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.00456857 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACCT TCACCGACCG CTGGCGGCAA CTGGACTGGG ACGATATTCG CCTGCGCATC 
AACGGTAAAA CCGCCGCCGA TGTGGAGCGG GCGCTGAATG CTTCACGCCT CAACCGCGAG
GATATGATGG CGTTACTTTC CCCCGCCGCC GCCGATTATC TTGAGCCGCT GGCGCAGCGG
GCACAAAGGC TGACCCGCCA GCGCTTTGGC AACACCGTCA GTTTCTATGT GCCGCTTTAT
CTCTCAAACC TCTGTGCCAA CGACTGCACC TACTGCGGTT TTTCGATGAG CAACCGCATC
AAGCGTAAAA CGCTGAATGA GGTGGATATT GAAAGGGAGT GCGACGCTAT CCGTGAGTTA
GGTTTTGAGC ATCTGCTATT AGTCACCGGC GAACATCAGG CCAAAGTCGG CATGGACTAT
TTTCGCCGTC ATTTACCCAC CATCCGCCGT CAATTTTCCT CTTTACAGAT GGAAGTCCAG
CCCTTGCCGC AAGAAAACTA TGCGGAGCTC AAAACGCTGG GGATCGATGG CGTGATGGTT
TATCAGGAGA CTTATCATGA GGCAATCTAT GCACAGCATC ACCTGAAGGG AAAGAAACAG
GACTTTTTCT GGCGGCTGGA AACGCCGGAT CGGTTAGGCC GGGCAGGTAT CGACAAAATC
GGTCTTGGCG CGCTAATTGG TCTGTCGGAC AACTGGCGGG TGGATTGCTA TATGGTGGCG
GAGCATCTGT TGTGGATGCA AAAACAGTAC TGGCAGAGTC GCTATTCTGT TTCCTTCCCG
CGTCTGCGTC CGTGTACTGG CGGTGTGGAA CCCGCATCTG TGATGGATGA AAAGCAACTG
GTGCAAACGA TTTGCGCTTT CCGGTTATTG GCGCCGGAAA TTGAATTATC ACTCTCCACC
CGCGAATCGC CGTGGTTCCG CGATAACGTG ATCCCGCTGG CGATCAATAA CGTCAGCGCC
TTCTCGAAAA CCCAGCCCGG TGGCTACGCT GACGATCATC CGGAACTGGA GCAGTTTTCT
CCCCACGATG CCCGTCGGCC AGAAGTCGTT GCAAGCGCGT TAAGCGCGCA AGGGTTACAG
CCCGTATGGA AAGACTGGGA CAGTTGGCTG GGGCGCGCTT CGCAAATGCG GTGA
 
Protein sequence
MKTFTDRWRQ LDWDDIRLRI NGKTAADVER ALNASRLNRE DMMALLSPAA ADYLEPLAQR 
AQRLTRQRFG NTVSFYVPLY LSNLCANDCT YCGFSMSNRI KRKTLNEVDI ERECDAIREL
GFEHLLLVTG EHQAKVGMDY FRRHLPTIRR QFSSLQMEVQ PLPQENYAEL KTLGIDGVMV
YQETYHEAIY AQHHLKGKKQ DFFWRLETPD RLGRAGIDKI GLGALIGLSD NWRVDCYMVA
EHLLWMQKQY WQSRYSVSFP RLRPCTGGVE PASVMDEKQL VQTICAFRLL APEIELSLST
RESPWFRDNV IPLAINNVSA FSKTQPGGYA DDHPELEQFS PHDARRPEVV ASALSAQGLQ
PVWKDWDSWL GRASQMR