| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4329 |
|---|
| Symbol | engB |
|---|
| ID | 6492456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 4217579 |
|---|
| End bp | 4218211 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642744416 |
|---|
| Product | ribosome biogenesis GTP-binding protein YsxC |
|---|
| Protein accession | YP_002048005 |
|---|
| Protein GI | 194447921 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.242343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTAACC TGAATTATCA ACAGACGCAT TTTGTGATGA GTGCGCCTGA TATTCGCCAT
TTACCTTCCG ATTGCGGAAT TGAAGTGGCT TTTGCTGGCC GTTCCAATGC AGGCAAATCC
AGCGCCCTGA ACACGTTGAC CAACCAAAAA AGCCTGGCGC GCACCTCTAA AACGCCGGGC
CGTACCCAAT TGATTAACCT GTTTGAAGTC GTAGATGGCA AACGGTTGGT CGACCTGCCG
GGCTATGGCT ACGCGGAAGT CCCGGAAGAG ATGAAACGCA AGTGGCAACG CGCGCTGGGG
GAATATCTGG AGAAACGTCA AAGCCTACAG GGCTTAGTCG TTTTAATGGA TATCCGCCAT
CCGTTGAAAG ACCTCGACCA ACAGATGATC CAGTGGGCTG TAGAGAGCAA TATCCAGGTT
CTGGTTCTGC TGACCAAAGC GGACAAACTG GCCAGCGGCG CGCGCAAGGC GCAGTTGAAT
ATGGTACGTG AAGCCGTGCT GGCTTTTAAT GGCGATGTGC AGGTAGAAGC GTTTTCCTCG
CTGAAAAAGC AGGGCGTGGA TAAGTTACGT CAGAAGCTGG ATAGCTGGTT TAGTGAACTG
GCACCGGTCG AAGAGATTCA GGACGGGGAA TAA
|
|---|
| Protein sequence | MTNLNYQQTH FVMSAPDIRH LPSDCGIEVA FAGRSNAGKS SALNTLTNQK SLARTSKTPG
RTQLINLFEV VDGKRLVDLP GYGYAEVPEE MKRKWQRALG EYLEKRQSLQ GLVVLMDIRH
PLKDLDQQMI QWAVESNIQV LVLLTKADKL ASGARKAQLN MVREAVLAFN GDVQVEAFSS
LKKQGVDKLR QKLDSWFSEL APVEEIQDGE
|
|---|
| |