Gene SeHA_C4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4279 
SymboluvrD 
ID6489334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4163913 
End bp4166075 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content58% 
IMG OID642744369 
ProductDNA-dependent helicase II 
Protein accessionYP_002047963 
Protein GI194451500 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID[TIGR01075] DNA helicase II 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTT CTTACCTGCT CGACAGCCTT AATGATAAAC AGCGCGAAGC GGTGGCCGCG 
CCACGTAGCA ACATGCTGGT GCTGGCGGGC GCGGGAAGCG GGAAAACCCG CGTGCTGGTG
CACCGTATCG CCTGGTTACT GAGCGTAGAA AACAATTCGC CATACTCCAT CATGGCGGTG
ACCTTTACCA ATAAAGCGGC GGCGGAAATG CGCCATCGTA TTGGCCAGTT GATGGGGACC
AGCCAGGGCG GAATGTGGGT AGGGACGTTC CACGGTCTGG CGCACCGCCT GCTGCGCGCG
CATCATATGG ACGCTAATTT GCCGCAGGAT TTCCAGATTC TCGACAGCGA AGATCAGATG
CGTTTGCTTA AACGCCTGAT TAAGGCGATG AATCTTGATG AGAAGCAGTG GCCGCCGCGT
CAGGCGATGT GGTACATCAA TAGCCAGAAA GACGAAGGGC TACGCCCGCA CCATATCCAA
AGCTATGGCA ACCCGGTGGA GCAGACCTGG CAGAAGGTGT ATCAGGCCTA TCAGGAAGCG
TGCGATCGCG CTGGTCTGGT GGATTTTGCC GAGCTACTGC TGCGCGCTCA TGAACTATGG
CTGAACAAGC CGCACATCCT GCAACACTAT CGCGAGCGGT TTACTAACAT CCTGGTGGAC
GAATTCCAGG ATACCAACAA CATTCAGTAC GCCTGGGTTC GTCTGCTGGC GGGCGATACC
GGTAAGGTGA TGATCGTTGG CGACGATGAC CAGTCGATCT ACGGCTGGCG CGGGGCCCAG
GTAGAGAACA TCCAGCGCTT CCTCAATGAT TTCCCCGGCG CGCAGACCAT TCGTCTGGAG
CAGAATTACC GCTCGACCAG CAACATCCTT AGCGCGGCGA ACGCTCTGAT TGAAAACAAC
AACGGGCGTT TGGGTAAAAA GCTGTGGACT GACGGCGTTG ATGGCGAACC GATATCGCTG
TACTGCGCTT TCAACGAGCT GGATGAAGCG CGCTTTGTGG TTAATCGTAT CAAAACCTGG
CAGGACAACG GCGGCGCGCT TGCGCAATGC GCCATCCTTT ATCGCAGCAA CGCCCAGTCG
CGCGTGCTGG AAGAGGCGTT ATTACAGGCC AGTATGCCGT ACCGCATTTA CGGCGGGATG
CGCTTCTTCG AACGCCAGGA GATCAAAGAT GCGCTCTCTT ATCTGCGTTT GATTGCCAAT
CGCAACGATG ATGCCGCTTT TGAACGCGTG GTGAATACCC CAACGCGCGG TATCGGCGAC
CGCACGCTGG ACGTGGTGCG CCAGACCTCG CGCGATCGCC AGCTAACATT GTGGCAGGCG
TGCCGTGAAT TGTTACAGGA AAAAGCCCTG GCCGGGCGTG CGGCCAGCGC GCTGCAACGC
TTTATGGAAC TGATCGACGC TCTGGCGCAG GAAACTGCCG ACATGCCGCT GCATGTGCAG
ACTGACCGGG TGATCAAAGA TTCCGGCCTG CGCACCATGT ATGAGCAAGA AAAAGGCGAG
AAAGGCCAGA CGCGCATCGA AAACTTAGAG GAACTGGTGA CGGCGACGCG GCAGTTCAGC
TACAACGACG AAGATGAAGA TTTAATGCCA TTGCAGGCCT TCCTCTCTCA CGCGGCGCTG
GAAGCGGGCG AGGGGCAGGC GGATACCTGG CAGGATGCGG TACAGCTGAT GACGCTGCAC
TCGGCCAAAG GGCTGGAGTT CCCGCAGGTG TTTATCGTCG GGATGGAAGA GGGGATGTTC
CCCAGCCAGA TGTCGCTGGA TGAGGGCGGG CGTTTGGAAG AGGAGCGTCG TCTGGCCTAC
GTCGGCGTTA CCCGTGCCAT GCAGAAACTG ACGCTAACCT ATGCCGAAAC TCGCCGTCTG
TATGGTAAAG AGGTCTACCA TCGCCCGTCG CGTTTCATCG GCGAACTGCC GGAGGAGTGC
GTGGAAGAGG TCCGTCTGCG CGCCACCGTC AGTCGTCCGG TGAGCCATCA ACGAATGGGA
ACGCCGCTGG CGGAAAACGA CACAGGCTAC AAACTCGGCC AACGCGTGCG CCATGCGAAG
TTCGGCGAGG GAACTATTGT CAACCTGGAG GGCAGCGGCG AGCATAGCCG GTTGCAGGTG
GCTTTTCAGG GGCAAGGGAT CAAATGGCTG GTTGCCGCGT ATGCGAAGCT GGAAACGGTT
TGA
 
Protein sequence
MDVSYLLDSL NDKQREAVAA PRSNMLVLAG AGSGKTRVLV HRIAWLLSVE NNSPYSIMAV 
TFTNKAAAEM RHRIGQLMGT SQGGMWVGTF HGLAHRLLRA HHMDANLPQD FQILDSEDQM
RLLKRLIKAM NLDEKQWPPR QAMWYINSQK DEGLRPHHIQ SYGNPVEQTW QKVYQAYQEA
CDRAGLVDFA ELLLRAHELW LNKPHILQHY RERFTNILVD EFQDTNNIQY AWVRLLAGDT
GKVMIVGDDD QSIYGWRGAQ VENIQRFLND FPGAQTIRLE QNYRSTSNIL SAANALIENN
NGRLGKKLWT DGVDGEPISL YCAFNELDEA RFVVNRIKTW QDNGGALAQC AILYRSNAQS
RVLEEALLQA SMPYRIYGGM RFFERQEIKD ALSYLRLIAN RNDDAAFERV VNTPTRGIGD
RTLDVVRQTS RDRQLTLWQA CRELLQEKAL AGRAASALQR FMELIDALAQ ETADMPLHVQ
TDRVIKDSGL RTMYEQEKGE KGQTRIENLE ELVTATRQFS YNDEDEDLMP LQAFLSHAAL
EAGEGQADTW QDAVQLMTLH SAKGLEFPQV FIVGMEEGMF PSQMSLDEGG RLEEERRLAY
VGVTRAMQKL TLTYAETRRL YGKEVYHRPS RFIGELPEEC VEEVRLRATV SRPVSHQRMG
TPLAENDTGY KLGQRVRHAK FGEGTIVNLE GSGEHSRLQV AFQGQGIKWL VAAYAKLETV