Gene SeHA_C4259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4259 
Symbol 
ID6492132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4149327 
End bp4150712 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content54% 
IMG OID642744352 
Productputative transport protein YifK 
Protein accessionYP_002047950 
Protein GI194451501 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000481193 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA AAAAACCGGA GCTACAGCGT GGGCTGGAAG CTCGTCATAT TGAATTGATT 
GCCCTCGGGG GCACCATCGG CGTCGGACTC TTTATGGGCG CCGCCAGTAC GCTGAAATGG
GCGGGCCCGT CAGTGCTGCT GGCGTATATC ATCGCCGGAT TGTTCGTCTT TTTCATCATG
CGCTCGATGG GGGAGATGCT CTTTCTGGAA CCTGTTACCG GCTCCTTTGC CGTGTACGCC
CACCGGTATA TGAGTCCTTT TTTTGGCTAT CTTACCGCCT GGTCATACTG GTTTATGTGG
ATGGCGGTCG GGATCTCGGA AATTACCGCC ATTGGGGTCT ACGTCCAGTT CTGGTTTCCT
GAGATGGCGC AGTGGATACC GGCGCTGATT GCCGTCGGAC TGGTTGCGTT GGCGAATTTG
GCTGCGGTGC GCCTGTATGG TGAAATCGAG TTCTGGTTTG CGATGATCAA AGTCACCACG
ATTATTGTGA TGATCATCAT CGGCCTGGGG GTGATTTTCT TCGGCTTTGG TAACGGCGGC
CAGGCGATTG GCTTTGGTAA TCTGACCGAG CATGGCGGCT TTTTTGCCGG CGGCTGGAAA
GGCTTTCTGA CCGCATTATG TATCGTGGTG GCCTCTTATC AAGGGGTTGA GTTGATCGGT
ATTACCGCCG GTGAAGCGAA GAATCCGCAG GTGACGTTGC GTAGCGCGGT GGGTAAGGTG
CTGTGGCGTA TCCTGATTTT TTATGTTGGC GCGATTTTCG TGATCGTCAC CATTTTCCCG
TGGAATGAGA TTGGCAGCAA CGGCAGTCCC TTTGTGCTCA CCTTCGCGAA AATCGGCATC
ACCGCCGCGG CAGGCATTAT CAACTTTGTC GTGCTGACGG CGGCGCTCTC CGGCTGTAAC
AGCGGAATGT ATAGCTGTGG GCGTATGCTT TACGCGCTGG CGAAAAACCG TCAACTGCCG
GCGGCAGTCG CGAAAGTCTC TCGCCACGGC GTGCCGGTCG CGGGCGTGGC GCTCTCTATT
TTGATTTTGC TGGTAGGTTC TTGCCTGAAC TACATCATCC CCAATCCGCA GCGCGTCTTT
GTTTACGTTT ATAGCGCCAG CGTACTGCCG GGGATGGTGC CGTGGTTTGT CATTCTGATT
AGCCAACTGC GCTTTCGTCG GGCGCATAAA GAAGCGATTG CGGATCATCC TTTTCGTTCC
ATTATGTTTC CGTGGGCGAA CTATTTGACG ATGGCGTTTC TGGTTTGCGT TTTAATCGGC
ATGTACTTTA ATGAAGATAC GCGCATGTCG CTGTTTGTCG GCGTCATCTT CCTGCTGGCC
GTCACGCTGG TCTACAAAGT TTTCGGCCTG AATCGTCACG GAACCGCCCA CAAGGTGGGG
GAATAA
 
Protein sequence
MAEKKPELQR GLEARHIELI ALGGTIGVGL FMGAASTLKW AGPSVLLAYI IAGLFVFFIM 
RSMGEMLFLE PVTGSFAVYA HRYMSPFFGY LTAWSYWFMW MAVGISEITA IGVYVQFWFP
EMAQWIPALI AVGLVALANL AAVRLYGEIE FWFAMIKVTT IIVMIIIGLG VIFFGFGNGG
QAIGFGNLTE HGGFFAGGWK GFLTALCIVV ASYQGVELIG ITAGEAKNPQ VTLRSAVGKV
LWRILIFYVG AIFVIVTIFP WNEIGSNGSP FVLTFAKIGI TAAAGIINFV VLTAALSGCN
SGMYSCGRML YALAKNRQLP AAVAKVSRHG VPVAGVALSI LILLVGSCLN YIIPNPQRVF
VYVYSASVLP GMVPWFVILI SQLRFRRAHK EAIADHPFRS IMFPWANYLT MAFLVCVLIG
MYFNEDTRMS LFVGVIFLLA VTLVYKVFGL NRHGTAHKVG E