| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4218 |
|---|
| Symbol | rbsK |
|---|
| ID | 6491773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 4105502 |
|---|
| End bp | 4106431 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642744312 |
|---|
| Product | ribokinase |
|---|
| Protein accession | YP_002047916 |
|---|
| Protein GI | 194450120 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 0.980767 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG CAGGTAATCT CATCGTCCTT GGCAGCATTA ATGCCGATCA TATCCTTAAT
CTTGAGTCCT TCCCTACCCC GGGTGAAACG GTAACCGGTA GCCATTATCA GGTCGCGTTT
GGTGGGAAAG GCGCGAATCA GGCGGTTGCT GCGGGACGTA GCGGGGCAAA TATTGCGTTT
ATCGCCTGCA CGGGCGATGA CGATATTGGC GACAGTATTC GTAAACAATT AGTCAGCGAT
CGTATTGATA TCGCGCCAGT TAGCGTTATT AAAGGCGAGT CTACCGGGGT GGCGCTGATT
TTCGTTAATG GCGAAGGCGA GAACGTCATC GGTATTCATG CCGGAGCGAA TGCCGCGTTA
TCGCCGGCGT TGGTTGATGC GCAGCGTGAA CGTATCGCGC AGGCGGATGC GTTACTGATG
CAACTGGAAT CGCCGCTGGA AAGCGTACTG GCGGCGGCGA AAATCGCCCA TCAACATCAT
ACTACTGTTG CGCTTAATCC GGCGCCTGCC CGTGAGTTAC CGGATGAACT GCTGGCGCTG
GTGGACATCA TCACGCCAAA TGAAACGGAA GCTGAAAAGC TGACGGGCGT GCGTGTGGAA
AATGACGACG ATGCCGCGAA AGCTGCGCAG GTTTTGCATG ATAAAGGCAT TCGAACCGTA
TTAATTACCT TAGGAAGCCG TGGCGTCTGG GCCAGCGTAG ACGGCGAGGG CCGCCGCGTT
CCTGGATTTA GCGTTGAGGC TGTCGATACC ATTGCTGCCG GAGATACGTT TAACGGCGCC
TTTATCACCG CGATACTGGA GGAGACGCCG TTGCCGGAAG CGATTCGCTT TGCCCATGCC
GCCGCCGCGA TTGCCGTAAC GCGTAAAGGC GCGCAACCTT CCGTTCCGTG GCGCGAAGAG
ATAGAAGCGT TTTTACATCA GCAGGGGTAA
|
|---|
| Protein sequence | MKTAGNLIVL GSINADHILN LESFPTPGET VTGSHYQVAF GGKGANQAVA AGRSGANIAF
IACTGDDDIG DSIRKQLVSD RIDIAPVSVI KGESTGVALI FVNGEGENVI GIHAGANAAL
SPALVDAQRE RIAQADALLM QLESPLESVL AAAKIAHQHH TTVALNPAPA RELPDELLAL
VDIITPNETE AEKLTGVRVE NDDDAAKAAQ VLHDKGIRTV LITLGSRGVW ASVDGEGRRV
PGFSVEAVDT IAAGDTFNGA FITAILEETP LPEAIRFAHA AAAIAVTRKG AQPSVPWREE
IEAFLHQQG
|
|---|
| |