Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4215 |
Symbol | rbsA |
ID | 6490865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 4101932 |
End bp | 4103482 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642744309 |
Product | D-ribose transporter ATP binding protein |
Protein accession | YP_002047913 |
Protein GI | 194448121 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 0.777457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACGT CATTCTTTGC GCTGGCGTCA CTTTCTGAGG CCGCTATGGA CGCATTACTG CAACTCAAAG GGATCGATAA AGCGTTCCCC GGCGTGAAGG CTCTCTCCGG CGCCGCGTTA AACGTTTATC CTGGCCGCGT TATGGCGCTG GTGGGGGAAA ACGGCGCCGG AAAATCCACC ATGATGAAAG TATTAACCGG CATCTATACG CGAGATGCGG GATCGTTGTT ATGGCTGGGT AAAGAGACCA CCTTTAATGG GCCTAAATCG TCTCAGGAAG CCGGGATCGG CATTATTCAT CAGGAACTGA ACCTGATCCC GCAGTTGACC ATTGCGGAAA ACATCTTCCT GGGCCGTGAG TTTGTGAATC GCTTTGGCAA AATCGACTGG AAAAAGATGT ATGCCGAAGC CGACCACCTC TTAGCCAAAC TCAATCTGCG TTTTAAGAGC GATAAGCTGG TGGGCGAACT CTCTATCGGC GATCAGCAAA TGGTGGAAAT CGCCAAAGTG CTGAGCTTCG AATCCAAAGT CATCATTATG GATGAACCGA CCGATGCGCT GACCGACACT GAAACCGACT CTCTGTTCCG CGTTATCCGC GAATTAAAAT CGCAGGGGCG CGGCATTGTC TATATCTCCC ACCGTATGAA AGAGATCTTC GAAATTTGCG ATGACGTGAC GGTCTTCCGC GATGGGCAAT TTATCGCCGA GCGTGAAGTG GCCACGTTGA CCGAAGATTC TCTTATCGAA ATGATGGTGG GACGTAAGCT GGAAGATCAG TACCCGCATC TGGATAACGC GCCGGGTGAG ATTCGCCTCA AGGTCGATAA TCTGTGCGGA CCGGGCGTGA ATGATGTCTC TTTTGTGCTG CGAAAAGGCG AGATTCTTGG CATCTCCGGC CTGATGGGCG CCGGTCGCAC CGAGCTGATG AAAGTATTGT ACGGCGCGAT GCCGCGAACC AGCGGTTATG TGACGCTCGA TGGACACGAA GTGGTGACGC GCTCTCCGCA GGACGGGCTG GCCAATGGCA TCGTTTATAT CTCTGAAGAC CGTAAGCGCG ATGGACTGGT GCTCGGCATG TCAGTTAAAG AGAATATGTC GCTGACGGCG CTGGACTATT TCAGCCGCGC TGGCGGAAGC CTGAAACACA AAGATGAGCA GCAGGCGGTG GGGGATTTTA TCCGTCTGTT CAACGTCAAG ACGCCTTCAA TGGAACAGGC GATAGGCCTG CTTTCCGGTG GTAATCAGCA AAAAGTGGCG ATTGCCCGCG GGTTGATGAC GCGCCCGAAA GTGCTCATTC TCGACGAGCC GACCCGCGGC GTGGACGTCG GCGCCAAGAA AGAGATTTAC CAGCTTATCA ACCAGTTTAA GGCCGACGGC CTGAGCATCA TTCTGGTCTC ATCTGAGATG CCAGAAGTAT TAGGCATGAG CGATCGCATC ATCGTCATGC ATGAAGGGCA TCTCAGCGGT GAATTTACTC GCGAGCAGGC CACCCAGGAA GAGTTAATGG CTGCCGCAGT GGGCAAGCTT AATCGCGTGA ATCAGGAGTA A
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Protein sequence | MRTSFFALAS LSEAAMDALL QLKGIDKAFP GVKALSGAAL NVYPGRVMAL VGENGAGKST MMKVLTGIYT RDAGSLLWLG KETTFNGPKS SQEAGIGIIH QELNLIPQLT IAENIFLGRE FVNRFGKIDW KKMYAEADHL LAKLNLRFKS DKLVGELSIG DQQMVEIAKV LSFESKVIIM DEPTDALTDT ETDSLFRVIR ELKSQGRGIV YISHRMKEIF EICDDVTVFR DGQFIAEREV ATLTEDSLIE MMVGRKLEDQ YPHLDNAPGE IRLKVDNLCG PGVNDVSFVL RKGEILGISG LMGAGRTELM KVLYGAMPRT SGYVTLDGHE VVTRSPQDGL ANGIVYISED RKRDGLVLGM SVKENMSLTA LDYFSRAGGS LKHKDEQQAV GDFIRLFNVK TPSMEQAIGL LSGGNQQKVA IARGLMTRPK VLILDEPTRG VDVGAKKEIY QLINQFKADG LSIILVSSEM PEVLGMSDRI IVMHEGHLSG EFTREQATQE ELMAAAVGKL NRVNQE
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