Gene SeHA_C4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4215 
SymbolrbsA 
ID6490865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4101932 
End bp4103482 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content54% 
IMG OID642744309 
ProductD-ribose transporter ATP binding protein 
Protein accessionYP_002047913 
Protein GI194448121 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.777457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACGT CATTCTTTGC GCTGGCGTCA CTTTCTGAGG CCGCTATGGA CGCATTACTG 
CAACTCAAAG GGATCGATAA AGCGTTCCCC GGCGTGAAGG CTCTCTCCGG CGCCGCGTTA
AACGTTTATC CTGGCCGCGT TATGGCGCTG GTGGGGGAAA ACGGCGCCGG AAAATCCACC
ATGATGAAAG TATTAACCGG CATCTATACG CGAGATGCGG GATCGTTGTT ATGGCTGGGT
AAAGAGACCA CCTTTAATGG GCCTAAATCG TCTCAGGAAG CCGGGATCGG CATTATTCAT
CAGGAACTGA ACCTGATCCC GCAGTTGACC ATTGCGGAAA ACATCTTCCT GGGCCGTGAG
TTTGTGAATC GCTTTGGCAA AATCGACTGG AAAAAGATGT ATGCCGAAGC CGACCACCTC
TTAGCCAAAC TCAATCTGCG TTTTAAGAGC GATAAGCTGG TGGGCGAACT CTCTATCGGC
GATCAGCAAA TGGTGGAAAT CGCCAAAGTG CTGAGCTTCG AATCCAAAGT CATCATTATG
GATGAACCGA CCGATGCGCT GACCGACACT GAAACCGACT CTCTGTTCCG CGTTATCCGC
GAATTAAAAT CGCAGGGGCG CGGCATTGTC TATATCTCCC ACCGTATGAA AGAGATCTTC
GAAATTTGCG ATGACGTGAC GGTCTTCCGC GATGGGCAAT TTATCGCCGA GCGTGAAGTG
GCCACGTTGA CCGAAGATTC TCTTATCGAA ATGATGGTGG GACGTAAGCT GGAAGATCAG
TACCCGCATC TGGATAACGC GCCGGGTGAG ATTCGCCTCA AGGTCGATAA TCTGTGCGGA
CCGGGCGTGA ATGATGTCTC TTTTGTGCTG CGAAAAGGCG AGATTCTTGG CATCTCCGGC
CTGATGGGCG CCGGTCGCAC CGAGCTGATG AAAGTATTGT ACGGCGCGAT GCCGCGAACC
AGCGGTTATG TGACGCTCGA TGGACACGAA GTGGTGACGC GCTCTCCGCA GGACGGGCTG
GCCAATGGCA TCGTTTATAT CTCTGAAGAC CGTAAGCGCG ATGGACTGGT GCTCGGCATG
TCAGTTAAAG AGAATATGTC GCTGACGGCG CTGGACTATT TCAGCCGCGC TGGCGGAAGC
CTGAAACACA AAGATGAGCA GCAGGCGGTG GGGGATTTTA TCCGTCTGTT CAACGTCAAG
ACGCCTTCAA TGGAACAGGC GATAGGCCTG CTTTCCGGTG GTAATCAGCA AAAAGTGGCG
ATTGCCCGCG GGTTGATGAC GCGCCCGAAA GTGCTCATTC TCGACGAGCC GACCCGCGGC
GTGGACGTCG GCGCCAAGAA AGAGATTTAC CAGCTTATCA ACCAGTTTAA GGCCGACGGC
CTGAGCATCA TTCTGGTCTC ATCTGAGATG CCAGAAGTAT TAGGCATGAG CGATCGCATC
ATCGTCATGC ATGAAGGGCA TCTCAGCGGT GAATTTACTC GCGAGCAGGC CACCCAGGAA
GAGTTAATGG CTGCCGCAGT GGGCAAGCTT AATCGCGTGA ATCAGGAGTA A
 
Protein sequence
MRTSFFALAS LSEAAMDALL QLKGIDKAFP GVKALSGAAL NVYPGRVMAL VGENGAGKST 
MMKVLTGIYT RDAGSLLWLG KETTFNGPKS SQEAGIGIIH QELNLIPQLT IAENIFLGRE
FVNRFGKIDW KKMYAEADHL LAKLNLRFKS DKLVGELSIG DQQMVEIAKV LSFESKVIIM
DEPTDALTDT ETDSLFRVIR ELKSQGRGIV YISHRMKEIF EICDDVTVFR DGQFIAEREV
ATLTEDSLIE MMVGRKLEDQ YPHLDNAPGE IRLKVDNLCG PGVNDVSFVL RKGEILGISG
LMGAGRTELM KVLYGAMPRT SGYVTLDGHE VVTRSPQDGL ANGIVYISED RKRDGLVLGM
SVKENMSLTA LDYFSRAGGS LKHKDEQQAV GDFIRLFNVK TPSMEQAIGL LSGGNQQKVA
IARGLMTRPK VLILDEPTRG VDVGAKKEIY QLINQFKADG LSIILVSSEM PEVLGMSDRI
IVMHEGHLSG EFTREQATQE ELMAAAVGKL NRVNQE