Gene SeHA_C4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4172 
SymboldnaA 
ID6491123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4057833 
End bp4059233 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content52% 
IMG OID642744267 
Productchromosomal replication initiation protein 
Protein accessionYP_002047871 
Protein GI194448643 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.049293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.324603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACTTT CGCTTTGGCA GCAGTGTCTT GCCCGATTGC AGGATGAGTT ACCAGCCACA 
GAATTCAGTA TGTGGATACG CCCGTTGCAG GCGGAACTGA GCGATAACAC GCTGGCTTTG
TATGCGCCAA ACCGTTTTGT GCTCGATTGG GTAAGAGATA AGTACCTCAA CAATATCAAT
GGATTACTCA ACACATTCTG CGGCGCGGAT GCCCCACAAC TGCGTTTTGA AGTGGGAACA
AAGCCCGTTA CGCAAACGCT AAAAACGCCT GTGCATAACG TTGTCGCGCC TGCGCAGACA
ACAACGGCGC AGCCGCAGCG CGTAGCGCCT GCGGCCCGTT CGGGCTGGGA TAACGTACCA
GCGCCAGCGG AGCCGACCTA CCGCTCCAAC GTCAATGTAA AACATACATT TGATAACTTC
GTCGAAGGTA AATCCAACCA ACTGGCGCGC GCGGCGGCAC GTCAGGTGGC GGATAATCCT
GGCGGCGCTT ATAACCCGTT ATTCCTCTAT GGCGGCACCG GTCTGGGTAA AACTCACCTG
CTGCACGCGG TGGGTAACGG CATTATGGCG CGTAAACCCA ACGCGAAAGT CGTGTATATG
CACTCCGAGC GCTTTGTGCA GGACATGGTA AAAGCCCTGC AAAATAACGC CATCGAAGAG
TTTAAACGCT ACTACCGCTC CGTTGACGCA TTGCTGATCG ACGATATTCA ATTCTTCGCC
AATAAAGAAC GATCCCAGGA AGAGTTTTTC CATACCTTTA ACGCTCTGCT GGAAGGCAAT
CAGCAGATCA TTTTGACGTC GGATCGCTAT CCGAAAGAGA TCAACGGCGT TGAGGATCGT
CTCAAGTCCC GCTTTGGTTG GGGGCTGACA GTGGCGATCG AACCGCCAGA ACTGGAAACC
CGCGTGGCGA TCCTGATGAA AAAAGCGGAC GAAAATGATA TTCGTCTGCC AGGCGAAGTA
GCGTTCTTTA TCGCCAAACG TCTACGCTCT AACGTGCGTG AACTGGAAGG CGCGTTGAAC
CGGGTGATTG CCAATGCCAA CTTTACCGGC CGGGCGATTA CTATCGACTT TGTGCGCGAA
GCGCTGCGCG ATTTACTGGC GTTGCAGGAA AAACTGGTCA CCATCGACAA TATTCAGAAG
ACGGTGGCCG AGTATTACAA AATCAAAATT GCGGATCTGC TTTCTAAGCG TCGATCTCGC
TCGGTAGCAC GTCCGCGCCA GATGGCTATG GCGCTGGCAA AAGAGCTCAC CAACCACAGT
CTGCCGGAAA TCGGCGATGC GTTTGGCGGG CGCGACCACA CTACCGTACT TCATGCCTGT
CGTAAAATTG AGCAACTGCG TGAAGAAAGC CACGATATCA AAGAAGATTT TTCGAATTTA
ATCAGAACAT TGTCGTCGTG A
 
Protein sequence
MSLSLWQQCL ARLQDELPAT EFSMWIRPLQ AELSDNTLAL YAPNRFVLDW VRDKYLNNIN 
GLLNTFCGAD APQLRFEVGT KPVTQTLKTP VHNVVAPAQT TTAQPQRVAP AARSGWDNVP
APAEPTYRSN VNVKHTFDNF VEGKSNQLAR AAARQVADNP GGAYNPLFLY GGTGLGKTHL
LHAVGNGIMA RKPNAKVVYM HSERFVQDMV KALQNNAIEE FKRYYRSVDA LLIDDIQFFA
NKERSQEEFF HTFNALLEGN QQIILTSDRY PKEINGVEDR LKSRFGWGLT VAIEPPELET
RVAILMKKAD ENDIRLPGEV AFFIAKRLRS NVRELEGALN RVIANANFTG RAITIDFVRE
ALRDLLALQE KLVTIDNIQK TVAEYYKIKI ADLLSKRRSR SVARPRQMAM ALAKELTNHS
LPEIGDAFGG RDHTTVLHAC RKIEQLREES HDIKEDFSNL IRTLSS