Gene SeHA_C4156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4156 
Symbol 
ID6490388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4038838 
End bp4039566 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content56% 
IMG OID642744251 
ProductDNA-binding transcriptional regulator TorR 
Protein accessionYP_002047855 
Protein GI194451840 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAT ATGAACAGAA AGAGACCGCG CGCAGGATGT CACATCACAT TGTTATTGTT 
GAGGATGAAC CTGTTACTCA GGCCAGATTA CAGGCCTATT TTGAGCAGGA GGGGTATCGC
GTTTCGGTGA CCGACAGCGG CGCGGGCCTG CGCGACATCA TGGAGCATGA GCACGTTTCG
CTGATCCTGC TGGATATCAA CCTCCCCGAC GAAAACGGGT TGATGCTGAC CAGGGCGCTA
CGCGAACGTT CCACGGTGGG CATTATTCTG GTGACGGGGC GTTGCGACCA AATTGACCGC
ATCGTCGGGC TGGAGATGGG CGCGGACGAC TACGTCACCA AGCCGCTGGA ACTGCGCGAG
CTGGTAGTGC GGGTGAAAAA CCTTTTGTGG CGCATCGATC TGGCCCGCCC CACGCCGCAA
AATGCTAGTG AAAACTGCTA TATGTTTTCC GGTTACTGCC TGAACGTGAT GAATCACACG
CTGGAGCACA ATGGTGAAGC CATTAAGCTT ACGCGCGCGG AATACGAGCT ACTGCTGGCC
TTTGTGACCA ACCCAGGCAA AGTGCTGCAT CGCGAACGTC TGCTGCGAAT GCTTTCCGCC
CGCCGCGTAG AGACTCCGGA TCTCCGCACG ATTGATGTCC TGGTTCGCCG CTTACGCCAT
AAAATTACGC CGGAACTGCT GGTCACACAG CATGGCGAAG GCTACTTTTT AGCCTCGGAG
GTGTATTGA
 
Protein sequence
MNRYEQKETA RRMSHHIVIV EDEPVTQARL QAYFEQEGYR VSVTDSGAGL RDIMEHEHVS 
LILLDINLPD ENGLMLTRAL RERSTVGIIL VTGRCDQIDR IVGLEMGADD YVTKPLELRE
LVVRVKNLLW RIDLARPTPQ NASENCYMFS GYCLNVMNHT LEHNGEAIKL TRAEYELLLA
FVTNPGKVLH RERLLRMLSA RRVETPDLRT IDVLVRRLRH KITPELLVTQ HGEGYFLASE
VY