| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4120 |
|---|
| Symbol | uhpB |
|---|
| ID | 6488018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 4003261 |
|---|
| End bp | 4004763 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642744216 |
|---|
| Product | sensory histidine kinase UhpB |
|---|
| Protein accession | YP_002047820 |
|---|
| Protein GI | 194449503 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.44208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 102 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCT TTTTTTCCCG TTTAATCACC GTTGTTGCCT GCTTTTTTAT CTTCTCCGCC
GCGTGGTTCT GCCTGTGGAG TATCAGCCTG CATCTGGTAG AGCGCCCGGA GCTGGCGGCG
CTACTCTTTC CCTTCGGCCT GCGCCTGGGA CTTATGCTGC AATGCCCGCG CGGATACTGG
CCAGTATTGC TGGGCGCGGA GTGGCTGCTG GTGTACTGGT TGGCGCAGGA AGTTGCGTTG
GCCCATCTGC CGCTTTTGAT GATCGGTAGT GTGTTGACGC TACTGCCCGT GGCGCTGACT
TCGCGTTACC GCCATCAGCG CGACTGGCGC ACGTTATTGC TTCAGGGCGC GGCCCTCACT
GCCGCGGCGC TACTGCAATC CCTGCCCTGG CTGGGGCAGG GGGAAGAGGC ATGGAACGCG
CTACTGCTGA CCCTCACGGG TGGTCTGACG CTGGCCCCCA TCTGCCTGGT TTTCTGGCAC
TATCTCACCA GCACTACCTG GCTGCCGCTG GGACCATCGC TGGTATCGCA GCCGGTAAAC
TGGCGCGGGC GGCATCTGAT CTGGTATCTG CTGCTGTTTA TCGTCAGTCT GTGGCTGCAA
CTGGGTTTAC CTGCTGAACT TTCGCGCTTT ACGCCGTTCT GCCTGGCGTT GCCGATTATC
GCGCTCGCCT GGCATTATGG CTGGCAGGGC GCGCTCATTG CCACACTGAT GAACGCTATC
GCGCTGATCG CCAGCCAGAC CTGGCACGAT CATCCCGTCG ATTTATTACT TTCGCTGTTG
GCGCAAAGCC TGACCGGGCT ACTGCTTGGC GCGGGCATTC AGCGTCTGCG CGAGCTGAAC
CAGTCGTTGC AAAAGGAGCT GGCGCGCAAC CATCGGCTGG CGGAGCGTCT TCTGGAGACC
GAAGAGAGCG TGCGGCGCGA TGTTGCGCGT GAGCTGCACG ATGACATCGG GCAGACCATC
ACCGCGATTC GTACCCAGGC GGGCATTGTG CAACGACTGG CGGCGGATAA CGGCGGCGTG
AAGCAGAGCG GGCAACTTAT CGAGCAGCTT TCGCTGGGCG TGTATGACGC GGTGCGTCGC
CTGCTGGGGC GCTTGCGCCC GCGCCAGTTA GACGACTTAA CGCTGGCGCA GGCCATCCGT
TCGCTGCTGC GCGAAATGGA GCTGGAAAGC CGCGGTATTG TCAGTCACCT CGACTGGCGA
ATTGACGAAA CGGCGCTGAG TGAAAGTCAG CGCGTGACGC TGTTTCGCGT CTGTCAGGAA
GGGCTGAATA ACATCGTAAA ACATGCCAAT GCCAGCGCGG TGACGCTCCA GGGCTGGCAG
CAGGATGAGC GGCTGATGCT GGTGATTGAG GATGACGGCA GCGGCCTGCC GCCGGGCTCT
CACCAGCAGG GCTTCGGCCT GACCGGAATG CGCGAACGCG TGTCGGCGCT CGGCGGGACG
CTAACCATCT CTTGTACCCA CGGTACGCGG GTGAGCGTCT CGTTGCCCCA GCGTTACGTT
TAA
|
|---|
| Protein sequence | MNTFFSRLIT VVACFFIFSA AWFCLWSISL HLVERPELAA LLFPFGLRLG LMLQCPRGYW
PVLLGAEWLL VYWLAQEVAL AHLPLLMIGS VLTLLPVALT SRYRHQRDWR TLLLQGAALT
AAALLQSLPW LGQGEEAWNA LLLTLTGGLT LAPICLVFWH YLTSTTWLPL GPSLVSQPVN
WRGRHLIWYL LLFIVSLWLQ LGLPAELSRF TPFCLALPII ALAWHYGWQG ALIATLMNAI
ALIASQTWHD HPVDLLLSLL AQSLTGLLLG AGIQRLRELN QSLQKELARN HRLAERLLET
EESVRRDVAR ELHDDIGQTI TAIRTQAGIV QRLAADNGGV KQSGQLIEQL SLGVYDAVRR
LLGRLRPRQL DDLTLAQAIR SLLREMELES RGIVSHLDWR IDETALSESQ RVTLFRVCQE
GLNNIVKHAN ASAVTLQGWQ QDERLMLVIE DDGSGLPPGS HQQGFGLTGM RERVSALGGT
LTISCTHGTR VSVSLPQRYV
|
|---|
| |