| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4065 |
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| Symbol | ligB |
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| ID | 6492284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | - |
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| Start bp | 3944166 |
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| End bp | 3945851 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642744165 |
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| Product | NAD-dependent DNA ligase LigB |
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| Protein accession | YP_002047770 |
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| Protein GI | 194449070 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTAT GGAAAAGTAT GGCGTGGGGA ATTTTATTGT GGCATTCGCA GAGTGGGGCG
CTTTGCCCGG CCTGGCCGCC AGCAAGGGCC GCTGAAGAAA TCGCCCGTTT ACAGCAACAG
CTCGCTGACT GGAATGACAT CTACTGGAAA CAAGGTGTTA GCGCGGTTGA CGATAGTGTG
TACGACCAAC TCAGCGCAAG GCTGGTTCAG TGGCAACGCT GTGTTGGTCA GGATGTTTCA
TCTACTCCGG TTTCACCGCC GTTAAACGGT ACAACAATGC ACCCTGTTGC GCACACGGGC
GTACGCAAAC TCGCGGACCG ACAGGCGGTA GAACAGTGGA TGCGCGGGCG CAGCGAGCTT
TGGGTACAAC CAAAAGTGGA TGGCGTAGCG GTAACACTGC TTTATCAAAA CGGTAAACTG
GCCAGGGCTA TCAGCCGGGG TAACGGACTA CAAGGCGAGG ACTGGACGCC AAAAATTCGC
CTGATCCCCT CTATACCGCA GTCAACACAA GGCGCGCTTG CTAACGCGGT GTTGCAGGGC
GAAATCTTTC TACAGCGCGA GGGACATATC CAGCAACGGA TGGGCGGGAT GAATGCGCGC
TCGAAAGTCG CAGGAATGTT AATGCGCCAG GATAACGCCT CCGCGCTAAA TTCGTTGGGT
ATTTTTATTT GGGCGTGGCC GGACGGTCCG GCAAATATGC CCGAAAGATT AAGCCAACTT
GCTAAGGCTG GATTCAGTCT GACGAAGAAA TATTCCCTGG TGGTAAAAGA TGCCAGCGAG
GTCGAGCGGG CGCGCCAGTC ATGGCTGACG TCAGCGTTGC CCTTTGTGAC GGATGGCGTA
GTGATACGCA TGGCTAAAGA ACCCGCGTCA CAATACTGGC GACCCGGGCA GGGCGACTGG
CTGGCAGCAT GGAAATATCC GCCAGTAGCG CAGGTCGCGC AAGTGAGCGC TATTCAGTTC
TCGGTGGGGA AAAGCGGCAA AATTACCGTA GTAGCGTCGC TTGTCCCCGT TATATTGGAT
GATAAGCGGG TTCAGCGGGT CAATATCGGT TCTGTGAAAC GTTGGGAAGC GTGGGATATC
GCGCCGGGCG ATCAGATCCT GGTGAGTCTG GCGGGGCAAG GCATTCCCCG GCTTGATGAG
GTCGTCTGGC GGAGTCGTGA GCGGAGTAAG CCTGTACCGC CTGATAGCCA TTTCAACTCG
CTGACCTGCT TTTACGCGTC GGAAACGTGT CAGGAACAGT TTATCTCCAG GCTGGTATGG
CTGGGGTCAC GGTCGGCGTT GGGTCTGGAC GGAATGGGCG AAGCCAGCTG GCGGGCCTTG
CATCAGACGC ATCGCTTTGA GCATATCTTC TCTTGGCTTG CCCTGACGTC AGCGCAAATA
GCCAACACGC CAGGCTTTGC TAAAGGAAAA AGCGAGCAGA TATGGCGGCA ATTTAACCTG
GCGCGTCGGC AGCCGTTTAC CCGCTGGATC ATGGCGATGG ATATCCCCTT AACGCAGGCC
GCATTACAGG CCAGCGGCGA TCGCTCATGG GAGCAGTTAT TAATGCGAAC AGAGCAACAC
TGGCGGCAGT TGCCAGCGAC GGGCGAGCGC CGTGCCGGGA GAGTTATCGA CTGGCGGGAT
AATCCGCAGA TCAAAACGCT GAGCAGATGG CTGGCTGCTC AGCATATTCC CGGATTTGGG
TCTTAG
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| Protein sequence | MRLWKSMAWG ILLWHSQSGA LCPAWPPARA AEEIARLQQQ LADWNDIYWK QGVSAVDDSV
YDQLSARLVQ WQRCVGQDVS STPVSPPLNG TTMHPVAHTG VRKLADRQAV EQWMRGRSEL
WVQPKVDGVA VTLLYQNGKL ARAISRGNGL QGEDWTPKIR LIPSIPQSTQ GALANAVLQG
EIFLQREGHI QQRMGGMNAR SKVAGMLMRQ DNASALNSLG IFIWAWPDGP ANMPERLSQL
AKAGFSLTKK YSLVVKDASE VERARQSWLT SALPFVTDGV VIRMAKEPAS QYWRPGQGDW
LAAWKYPPVA QVAQVSAIQF SVGKSGKITV VASLVPVILD DKRVQRVNIG SVKRWEAWDI
APGDQILVSL AGQGIPRLDE VVWRSRERSK PVPPDSHFNS LTCFYASETC QEQFISRLVW
LGSRSALGLD GMGEASWRAL HQTHRFEHIF SWLALTSAQI ANTPGFAKGK SEQIWRQFNL
ARRQPFTRWI MAMDIPLTQA ALQASGDRSW EQLLMRTEQH WRQLPATGER RAGRVIDWRD
NPQIKTLSRW LAAQHIPGFG S
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