Gene SeHA_C4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4060 
Symbolrph 
ID6488037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3939689 
End bp3940405 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID642744160 
Productribonuclease PH 
Protein accessionYP_002047765 
Protein GI194448918 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.944116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCAG CAGGCCGTAG CGCTAATCAG GTGCGTCCCG TAACCCTGAC CCGTAACTAT 
ACAAAACACG CTGAAGGCTC GGTACTGGTC GAATTTGGAG ATACTAAAGT GTTGTGCACT
GCCTCCATTG AAGAGGGCGT TCCACGTTTT CTGAAAGGAC AAGGCCAGGG GTGGATCACC
GCAGAGTATG GCATGTTGCC TCGCGCTACC CATACCCGTA ACGCGCGCGA AGCGGCAAAG
GGTAAGCAGG GCGGCCGTAC TATGGAAATT CAGCGTTTGA TCGCGCGTGC GCTGCGTGCG
GCGGTCGATC TGAAAACGCT CGGCGAATTT ACCATTACGC TGGACTGCGA TGTAATCCAG
GCCGATGGCG GTACGCGTAC AGCGTCTATT ACCGGTGCCT GCGTGGCGTT GGCGGATGCG
CTGAATAAAT TGGTTGCCAA CGGTAAGCTG AAAACCAATC CGATGAAAGG CATGGTGGCG
GCGGTTTCCG TAGGCATCGT TAACGGCGAA GCGATCTGCG ATCTGGAATA TGTTGAAGAT
TCCGCAGCAG AAACCGACAT GAACGTCGTG ATGACTGAAG ACGGCCGTAT TATTGAAGTA
CAGGGTACCG CGGAAGGCGA GCCGTTCAGC CATGAAGAAC TTCTCACTTT GTTGGCGCTG
GCCCGAGGGG GAATTGAATC CATTGTGGCG ACGCAGAAGG CGGCGTTAGA AAATTGA
 
Protein sequence
MRPAGRSANQ VRPVTLTRNY TKHAEGSVLV EFGDTKVLCT ASIEEGVPRF LKGQGQGWIT 
AEYGMLPRAT HTRNAREAAK GKQGGRTMEI QRLIARALRA AVDLKTLGEF TITLDCDVIQ
ADGGTRTASI TGACVALADA LNKLVANGKL KTNPMKGMVA AVSVGIVNGE AICDLEYVED
SAAETDMNVV MTEDGRIIEV QGTAEGEPFS HEELLTLLAL ARGGIESIVA TQKAALEN