Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4060 |
Symbol | rph |
ID | 6488037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3939689 |
End bp | 3940405 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642744160 |
Product | ribonuclease PH |
Protein accession | YP_002047765 |
Protein GI | 194448918 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 0.944116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCAG CAGGCCGTAG CGCTAATCAG GTGCGTCCCG TAACCCTGAC CCGTAACTAT ACAAAACACG CTGAAGGCTC GGTACTGGTC GAATTTGGAG ATACTAAAGT GTTGTGCACT GCCTCCATTG AAGAGGGCGT TCCACGTTTT CTGAAAGGAC AAGGCCAGGG GTGGATCACC GCAGAGTATG GCATGTTGCC TCGCGCTACC CATACCCGTA ACGCGCGCGA AGCGGCAAAG GGTAAGCAGG GCGGCCGTAC TATGGAAATT CAGCGTTTGA TCGCGCGTGC GCTGCGTGCG GCGGTCGATC TGAAAACGCT CGGCGAATTT ACCATTACGC TGGACTGCGA TGTAATCCAG GCCGATGGCG GTACGCGTAC AGCGTCTATT ACCGGTGCCT GCGTGGCGTT GGCGGATGCG CTGAATAAAT TGGTTGCCAA CGGTAAGCTG AAAACCAATC CGATGAAAGG CATGGTGGCG GCGGTTTCCG TAGGCATCGT TAACGGCGAA GCGATCTGCG ATCTGGAATA TGTTGAAGAT TCCGCAGCAG AAACCGACAT GAACGTCGTG ATGACTGAAG ACGGCCGTAT TATTGAAGTA CAGGGTACCG CGGAAGGCGA GCCGTTCAGC CATGAAGAAC TTCTCACTTT GTTGGCGCTG GCCCGAGGGG GAATTGAATC CATTGTGGCG ACGCAGAAGG CGGCGTTAGA AAATTGA
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Protein sequence | MRPAGRSANQ VRPVTLTRNY TKHAEGSVLV EFGDTKVLCT ASIEEGVPRF LKGQGQGWIT AEYGMLPRAT HTRNAREAAK GKQGGRTMEI QRLIARALRA AVDLKTLGEF TITLDCDVIQ ADGGTRTASI TGACVALADA LNKLVANGKL KTNPMKGMVA AVSVGIVNGE AICDLEYVED SAAETDMNVV MTEDGRIIEV QGTAEGEPFS HEELLTLLAL ARGGIESIVA TQKAALEN
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