| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4055 |
|---|
| Symbol | radC |
|---|
| ID | 6492360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3935690 |
|---|
| End bp | 3936355 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642744156 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_002047761 |
|---|
| Protein GI | 194447446 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.298214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGT TGGACGAATT ATTACCGCGT GAAAAAATGC TCAGATCCGG CATTGCTTCC
CTCAGCGACG TGGAGCTGCT GGCGCTTTTT TTACGTACCG GCACGCCGGG AAAAGATGTT
ATGACGTTGG CAAAAGAGAT ATTGCAGCAC TTTGGGTCGC TGTATGGCCT GCTGTCGGCG
GACTTTGCGC AGTTTCGTGG CGTAAACGGC ATCGGCCTGG CGAAATTCGC GCAGTTGAAA
GGCATTGCTG AGCTGGCAAG GCGCTATTAC AGCGTGCGCA TGAATGAGGA AAGTGCGTTG
CTGAGTCCGG AAATGACGCG GGAATTTCTG CAAAGCCAAC TGACGGGCGA AGAGCGTGAG
ATCTTTCTGG TGATCTTCCT CGATGCCCAG CACCGGGTGC TTCAGCACAG CCGCCTGTTT
TCCGGCACGC TTAACCACGT AGAGGTGCAT CCGCGTGAGA TTGTTCGGGA AGCGATTAAA
CTCAATGCTT CAGCGGTCAT TCTGGCGCAT AACCACCCTT CAGGCTGCGC AGAGCCAAGT
AAAGCAGATA AACTTATCAC CGAGCGCGTG ATAAAGTGTT GCCAGTTTAT GGATATCCGG
GTGCTCGATC ACCTGATAAT TGGGCGCGGA GAGTACGTTT CTTTTGCCGA ACGCGGCTGG
ATTTAA
|
|---|
| Protein sequence | MDTLDELLPR EKMLRSGIAS LSDVELLALF LRTGTPGKDV MTLAKEILQH FGSLYGLLSA
DFAQFRGVNG IGLAKFAQLK GIAELARRYY SVRMNEESAL LSPEMTREFL QSQLTGEERE
IFLVIFLDAQ HRVLQHSRLF SGTLNHVEVH PREIVREAIK LNASAVILAH NHPSGCAEPS
KADKLITERV IKCCQFMDIR VLDHLIIGRG EYVSFAERGW I
|
|---|
| |