Gene SeHA_C4043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4043 
Symbol 
ID6488846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3926525 
End bp3927538 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content37% 
IMG OID642744144 
Productlipopolysaccharide 1,3-galactosyltransferase 
Protein accessionYP_002047749 
Protein GI194451361 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.149434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAA AATATTTTGA AGAAGAAGTC ATTCAACAGA CTTTAGATTA TAACTATGCA 
CAACATAGTG ATGCTGATAA ATTTAATATA GCTTATGGGA TTGATAAAAA CTTTCTTTTT
GGCTGTGGTG TCTCTATTGC ATCGGTTCTC CTCGCTAATC CAGAGAAGGC GTTAGCTTTC
CATGTTTTTA CCGATTTCTT TGACTCTGAA GACCAGCAGC GATTTGAGGC ATTAGCAAAA
CAGTACGCTA CGCAGATTGT TGTTTACCTA ATCGACTGTG AGCGCTTAAA ATCGCTACCC
AGTACCAAAA ACTGGACCTA TGCAACATAC TTTAGATTCA TTATCGCCGA TTATTTTTCA
GATAAAACAG ATAGAGTACT TTATCTGGAT GCAGATATTG CATGTAAGGG GAGTATTCAG
GAACTTATTG ATCTTAATTT TGCTGAAAAT GAGATTGCGG CTGTCGTTGC TGAAGGCGAG
TTGGAATGGT GGACTAAGCG CTCGGTTAGC CTGGCAACGC CTGGGCTGGT TTCTGGCTAT
TTTAATGCCG GTTTTATTTT AATTAACATA CCTCTTTGGA CTGCAGAAAA TATCTCTAAG
AAAGCGATTG AAATGCTAAA AGATCCAGAG GTAGTACAGC GCATAACGCA CCTTGATCAG
GATGTATTAA ATATATTTTT AGTGAATAAA GCGCGTTTTG TTGATAAAAA ATTTAATACA
CAATTTAGTC TTAACTATGA ATTAAAAGAT TCAGTTATTA ATCCAGTTGA TGCTGAGACT
GTATTTGTTC ATTATATCGG ACCAACGAAG CCCTGGCATA GTTGGGGGGC TTACCCCGTG
TCACAATATT TTTTACAGGC TAAGAGCAAC TCACCATGGT CTCATTGTGC ACTTTTAAAT
CCAGTGACTA GCCATCAGTT ACGTTATGCG GCAAAGCATA TGTTTAATCA GAAGCATTAT
ACTTCGGGTA TAAATTATTA TATAGCCTAC TTTAAACGTA AACTTCTTGA ATAA
 
Protein sequence
MSRKYFEEEV IQQTLDYNYA QHSDADKFNI AYGIDKNFLF GCGVSIASVL LANPEKALAF 
HVFTDFFDSE DQQRFEALAK QYATQIVVYL IDCERLKSLP STKNWTYATY FRFIIADYFS
DKTDRVLYLD ADIACKGSIQ ELIDLNFAEN EIAAVVAEGE LEWWTKRSVS LATPGLVSGY
FNAGFILINI PLWTAENISK KAIEMLKDPE VVQRITHLDQ DVLNIFLVNK ARFVDKKFNT
QFSLNYELKD SVINPVDAET VFVHYIGPTK PWHSWGAYPV SQYFLQAKSN SPWSHCALLN
PVTSHQLRYA AKHMFNQKHY TSGINYYIAY FKRKLLE