Gene SeHA_C4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4017 
Symbol 
ID6490860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp3900574 
End bp3901350 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content57% 
IMG OID642744118 
ProductDNA-binding transcriptional repressor LldR 
Protein accessionYP_002047723 
Protein GI194447966 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTGA TGCCAAAACG CCTGTCAGAC GAGATTGCCT CTCGCGTGCG GGCGCTGATT 
GAAGAACAAA ACCTGGAAGC GGGCATGAAA TTGCCCGCCG AGCGCCAGTT GGCTCTACAG 
CTTGGCGTAT CACGCAACTC TTTACGCGAA GCGCTGGCGA AGCTGGTCAG TGAAGGCGTG 
CTGGTGAGTC GTCGCGGCGG CGGGACATTT GTCCGCTGGC AGCACGAAAC CTGGTCTGAA 
CAGAATATCG TGCAACCGCT GAAAATGCTG ATGGCGAACG ATCCGGACTA CAGTTTCGAC 
ATTCTGGAAG CCCGCCACGC CATTGAAGCC AGTACGGCCT GGCACGCCGC CATGCGTGCC 
ACCGCTGCCG ACAAAGAGAA AATCAGACTC TGCTTTGATG CGACGCTCAG CGAAGACCCG 
GATCTCGCCT CCCAGGCCGA CGTGCGCTTT CATCTGGCGA TCGCGGAAGC CTCGCACAAT 
GTGGTGCTGT TGCAAACCAT GCGCGGTTTC TTCGACGTCC TGCAATCCTC CGTCAAACAG 
AGTCGCCAGC GTATGTATCT CGTTCCGCCC GTATTCTCAA AGCTGACGGA ACAACACCAG 
GCAGTGATGG ACGCCATTCT GGACGGTAAC GCCGAGGGCG CGCGTAAAGC GATGATGGCG 
CACCTCAGTT TTGTCCACAC CACGATTAAA CGATTTGATG AAGACCAGGC CCGCCAGGCG 
CGTATTACCC GCCTGCCCGG CGACCATAAT GAGATGACCA GGGAGAATAA ATCATGA
 
Protein sequence
MIVMPKRLSD EIASRVRALI EEQNLEAGMK LPAERQLALQ LGVSRNSLRE ALAKLVSEGV 
LVSRRGGGTF VRWQHETWSE QNIVQPLKML MANDPDYSFD ILEARHAIEA STAWHAAMRA 
TAADKEKIRL CFDATLSEDP DLASQADVRF HLAIAEASHN VVLLQTMRGF FDVLQSSVKQ 
SRQRMYLVPP VFSKLTEQHQ AVMDAILDGN AEGARKAMMA HLSFVHTTIK RFDEDQARQA 
RITRLPGDHN EMTRENKS