Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3949 |
Symbol | dppB |
ID | 6487661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3826352 |
End bp | 3827371 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642744053 |
Product | dipeptide transporter permease DppB |
Protein accession | YP_002047659 |
Protein GI | 194451380 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.788898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCAGT TCATTCTCCG ACGTTTGGGA CTCGTTATCC CGACGTTTAT CGGTATTACC CTTCTCACCT TTGCCTTTGT CCACATGATC CCCGGCGATC CGGTGATGAT CATGGCGGGT GAGCGAGGTA TTTCCCCTGA GCGCCATGCT CAACTGCTGG CTGAACTCGG TCTTGATAAA CCGATGTGGC AGCAGTACCT CCATTATATC TGGGGGGTGA TGCATGGCGA TTTAGGCATC TCGCTGAAAA GCCGAATCCC TGTGTGGGAC GAGTTTGTGC CTCGCTTTAA AGCGACGCTG GAACTTGGCG TCTGCGCCAT GATTTTTGCC GTCGCCGTGG GGATTCCGGT GGGCGTGCTG GCCGCAGTGA AGCGCGGTTC TATCTTCGAT CACACTGCCG TTGGCCTGGC GCTGACCGGT TACTCTATGC CTATCTTCTG GTGGGGCATG ATGCTGATCA TGCTGGTCTC CGTCCACTGG AACCTGACGC CGGTTTCCGG GCGCGTGAGC GATATGGTGT TCCTTGATGA TACCAATCCG TTGACGGGCT TTATGCTGAT CGACACCGCT ATCTGGGGCG AAGAGGGTAA CTTTATTGAT GCGCTGGCGC ATATGATCCT GCCTGCGATG GTGCTCGGCA CAATCCCGCT GGCCGTCATT GTGCGTATGA CCCGTTCGTC GATGCTGGAA GTGCTGGGGG AGGATTATAT CCGTACCGCA CGCGCCAAAG GGTTGACCAG GATGCGCGTC ATTATCGTCC ATGCTCTGCG TAACGCCATG CTGCCAGTCG TCACCGTGAT CGGCCTGCAG GTCGGGACGC TGTTGGCGGG CGCGATTCTG ACAGAAACTA TCTTCTCGTG GCCCGGTCTG GGGCGCTGGC TGATCGATGC GCTGCAACGC CGCGATTATC CGGTAGTGCA GGGCGGCGTG TTACTGGTAG CGACGATGAT TATTCTCGTC AACCTGCTGG TAGACCTGCT GTACGGCGTG GTGAACCCGC GTATTCGGCA TAAGAAGTAA
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Protein sequence | MLQFILRRLG LVIPTFIGIT LLTFAFVHMI PGDPVMIMAG ERGISPERHA QLLAELGLDK PMWQQYLHYI WGVMHGDLGI SLKSRIPVWD EFVPRFKATL ELGVCAMIFA VAVGIPVGVL AAVKRGSIFD HTAVGLALTG YSMPIFWWGM MLIMLVSVHW NLTPVSGRVS DMVFLDDTNP LTGFMLIDTA IWGEEGNFID ALAHMILPAM VLGTIPLAVI VRMTRSSMLE VLGEDYIRTA RAKGLTRMRV IIVHALRNAM LPVVTVIGLQ VGTLLAGAIL TETIFSWPGL GRWLIDALQR RDYPVVQGGV LLVATMIILV NLLVDLLYGV VNPRIRHKK
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