Gene SeHA_C3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3949 
SymboldppB 
ID6487661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3826352 
End bp3827371 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content57% 
IMG OID642744053 
Productdipeptide transporter permease DppB 
Protein accessionYP_002047659 
Protein GI194451380 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.788898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGT TCATTCTCCG ACGTTTGGGA CTCGTTATCC CGACGTTTAT CGGTATTACC 
CTTCTCACCT TTGCCTTTGT CCACATGATC CCCGGCGATC CGGTGATGAT CATGGCGGGT
GAGCGAGGTA TTTCCCCTGA GCGCCATGCT CAACTGCTGG CTGAACTCGG TCTTGATAAA
CCGATGTGGC AGCAGTACCT CCATTATATC TGGGGGGTGA TGCATGGCGA TTTAGGCATC
TCGCTGAAAA GCCGAATCCC TGTGTGGGAC GAGTTTGTGC CTCGCTTTAA AGCGACGCTG
GAACTTGGCG TCTGCGCCAT GATTTTTGCC GTCGCCGTGG GGATTCCGGT GGGCGTGCTG
GCCGCAGTGA AGCGCGGTTC TATCTTCGAT CACACTGCCG TTGGCCTGGC GCTGACCGGT
TACTCTATGC CTATCTTCTG GTGGGGCATG ATGCTGATCA TGCTGGTCTC CGTCCACTGG
AACCTGACGC CGGTTTCCGG GCGCGTGAGC GATATGGTGT TCCTTGATGA TACCAATCCG
TTGACGGGCT TTATGCTGAT CGACACCGCT ATCTGGGGCG AAGAGGGTAA CTTTATTGAT
GCGCTGGCGC ATATGATCCT GCCTGCGATG GTGCTCGGCA CAATCCCGCT GGCCGTCATT
GTGCGTATGA CCCGTTCGTC GATGCTGGAA GTGCTGGGGG AGGATTATAT CCGTACCGCA
CGCGCCAAAG GGTTGACCAG GATGCGCGTC ATTATCGTCC ATGCTCTGCG TAACGCCATG
CTGCCAGTCG TCACCGTGAT CGGCCTGCAG GTCGGGACGC TGTTGGCGGG CGCGATTCTG
ACAGAAACTA TCTTCTCGTG GCCCGGTCTG GGGCGCTGGC TGATCGATGC GCTGCAACGC
CGCGATTATC CGGTAGTGCA GGGCGGCGTG TTACTGGTAG CGACGATGAT TATTCTCGTC
AACCTGCTGG TAGACCTGCT GTACGGCGTG GTGAACCCGC GTATTCGGCA TAAGAAGTAA
 
Protein sequence
MLQFILRRLG LVIPTFIGIT LLTFAFVHMI PGDPVMIMAG ERGISPERHA QLLAELGLDK 
PMWQQYLHYI WGVMHGDLGI SLKSRIPVWD EFVPRFKATL ELGVCAMIFA VAVGIPVGVL
AAVKRGSIFD HTAVGLALTG YSMPIFWWGM MLIMLVSVHW NLTPVSGRVS DMVFLDDTNP
LTGFMLIDTA IWGEEGNFID ALAHMILPAM VLGTIPLAVI VRMTRSSMLE VLGEDYIRTA
RAKGLTRMRV IIVHALRNAM LPVVTVIGLQ VGTLLAGAIL TETIFSWPGL GRWLIDALQR
RDYPVVQGGV LLVATMIILV NLLVDLLYGV VNPRIRHKK