Gene SeHA_C3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3916 
Symbol 
ID6490571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3787647 
End bp3788366 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID642744023 
ProductGntR family regulatory protein 
Protein accessionYP_002047629 
Protein GI194448780 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC AACCCGACAG TAAAAGCGCC AAACCGCTTT ATAAGCAGCT TGAAGATGCC 
TTAAAAGAGG CCATTGCGCG TGGAGAGTAT AAACCAGGCC AGCAGATCCC GACGGAAAAT 
GAACTGAGCG TGCGCTGGCA GGTGAGCAGG GTCACGGTCC GTAAGGCGCT GGATGCGCTG 
ACGCGTGAAA ATTTGCTGAC CCGTGTCTCC GGCAAAGGCA CCTTTGTCTC TAGTGAGAAA 
TTTCAGCGTA GCATGATCGG CATCATGAGT TTCAGCGAGT TATGCCAGTC CCAGGGACGT 
CGCCCGGGGT CACGCACTAT CAAATCCGTT TTTGAATCGG TAGACAATGA GACAAAAGCG 
TTACTGAATA TGAACGATGG CGAAAAAGCG GTCGTCATTG AACGTATCCG CTATGCCGAC 
GATGTGGCGG TATCGCTGGA AACCGTACAT CTTCCCCCAC GTTTTGCGTT TTTGCTGGAC 
GAAGATCTTA ATAATCACTC TTTGTATGAA TGCTTACGCG AGAAACACCA CTTATGGTTT 
ACCCACTCCC GTAAGATGAT CGAACTGGTT TATGCCAGCT TTGAAGTCGC CCATTATCTT 
GGCGTCAACG AGGGTTATCC GCTGATCCTG ATAAAAAGTG AAATGATTGA TAACAAAGGA 
GAACTCTCCT GCGTTTCGCA ACAGTTGATT GTCGGCGATA AAATACGGTT TACCGTATGA
 
Protein sequence
MIEQPDSKSA KPLYKQLEDA LKEAIARGEY KPGQQIPTEN ELSVRWQVSR VTVRKALDAL 
TRENLLTRVS GKGTFVSSEK FQRSMIGIMS FSELCQSQGR RPGSRTIKSV FESVDNETKA 
LLNMNDGEKA VVIERIRYAD DVAVSLETVH LPPRFAFLLD EDLNNHSLYE CLREKHHLWF 
THSRKMIELV YASFEVAHYL GVNEGYPLIL IKSEMIDNKG ELSCVSQQLI VGDKIRFTV